Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21745 and AO353_21750 are separated by 24 nucleotides AO353_21750 and AO353_21755 are separated by 53 nucleotides AO353_21755 and AO353_21760 are separated by 144 nucleotides
AO353_21745: AO353_21745 - ketodeoxygluconokinase, at 4,766,196 to 4,767,131
_21745
AO353_21750: AO353_21750 - peptidylprolyl isomerase, at 4,767,156 to 4,767,431
_21750
AO353_21755: AO353_21755 - histidine kinase, at 4,767,485 to 4,770,022
_21755
AO353_21760: AO353_21760 - twitching motility protein PilT, at 4,770,167 to 4,771,285
_21760
Position (kb)
4767
4768
4769
4770
4771 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4766.485 kb on - strand, within AO353_21745 at 4766.485 kb on - strand, within AO353_21745 at 4766.527 kb on - strand, within AO353_21745 at 4766.604 kb on + strand, within AO353_21745 at 4766.616 kb on + strand, within AO353_21745 at 4766.616 kb on + strand, within AO353_21745 at 4766.616 kb on + strand, within AO353_21745 at 4766.617 kb on - strand at 4766.617 kb on - strand, within AO353_21745 at 4766.617 kb on - strand at 4766.617 kb on - strand, within AO353_21745 at 4766.617 kb on - strand, within AO353_21745 at 4766.617 kb on - strand, within AO353_21745 at 4766.660 kb on + strand, within AO353_21745 at 4766.728 kb on - strand, within AO353_21745 at 4766.728 kb on - strand, within AO353_21745 at 4766.790 kb on + strand, within AO353_21745 at 4766.790 kb on + strand, within AO353_21745 at 4766.791 kb on - strand, within AO353_21745 at 4766.887 kb on + strand, within AO353_21745 at 4767.021 kb on + strand, within AO353_21745 at 4767.022 kb on - strand, within AO353_21745 at 4767.166 kb on + strand at 4767.325 kb on + strand, within AO353_21750 at 4767.325 kb on + strand, within AO353_21750 at 4767.326 kb on - strand at 4767.326 kb on - strand, within AO353_21750 at 4767.326 kb on - strand, within AO353_21750 at 4767.366 kb on - strand, within AO353_21750 at 4767.366 kb on - strand, within AO353_21750 at 4767.441 kb on + strand at 4767.441 kb on + strand at 4767.441 kb on + strand at 4767.441 kb on + strand at 4767.442 kb on - strand at 4767.442 kb on - strand at 4767.442 kb on - strand at 4767.474 kb on + strand at 4767.475 kb on - strand at 4767.475 kb on - strand at 4767.620 kb on + strand at 4767.621 kb on - strand at 4767.621 kb on - strand at 4767.778 kb on - strand, within AO353_21755 at 4767.930 kb on + strand, within AO353_21755 at 4767.931 kb on - strand, within AO353_21755 at 4767.931 kb on - strand, within AO353_21755 at 4767.931 kb on - strand, within AO353_21755 at 4768.006 kb on - strand, within AO353_21755 at 4768.006 kb on - strand, within AO353_21755 at 4768.006 kb on - strand, within AO353_21755 at 4768.006 kb on - strand, within AO353_21755 at 4768.131 kb on + strand, within AO353_21755 at 4768.131 kb on + strand, within AO353_21755 at 4768.131 kb on + strand, within AO353_21755 at 4768.132 kb on - strand, within AO353_21755 at 4768.132 kb on - strand, within AO353_21755 at 4768.132 kb on - strand, within AO353_21755 at 4768.132 kb on - strand, within AO353_21755 at 4768.183 kb on - strand, within AO353_21755 at 4768.183 kb on - strand, within AO353_21755 at 4768.183 kb on - strand, within AO353_21755 at 4768.187 kb on - strand, within AO353_21755 at 4768.187 kb on - strand, within AO353_21755 at 4768.187 kb on - strand, within AO353_21755 at 4768.187 kb on - strand, within AO353_21755 at 4768.187 kb on - strand, within AO353_21755 at 4768.187 kb on - strand, within AO353_21755 at 4768.328 kb on + strand, within AO353_21755 at 4768.328 kb on + strand, within AO353_21755 at 4768.328 kb on + strand, within AO353_21755 at 4768.328 kb on + strand, within AO353_21755 at 4768.328 kb on + strand, within AO353_21755 at 4768.328 kb on + strand, within AO353_21755 at 4768.328 kb on + strand, within AO353_21755 at 4768.328 kb on + strand, within AO353_21755 at 4768.328 kb on + strand, within AO353_21755 at 4768.329 kb on - strand, within AO353_21755 at 4768.329 kb on - strand, within AO353_21755 at 4768.329 kb on - strand, within AO353_21755 at 4768.329 kb on - strand, within AO353_21755 at 4768.329 kb on - strand, within AO353_21755 at 4768.329 kb on - strand, within AO353_21755 at 4768.329 kb on - strand, within AO353_21755 at 4768.330 kb on + strand, within AO353_21755 at 4768.331 kb on - strand, within AO353_21755 at 4768.524 kb on + strand, within AO353_21755 at 4768.525 kb on - strand, within AO353_21755 at 4768.525 kb on - strand, within AO353_21755 at 4768.525 kb on - strand, within AO353_21755 at 4768.525 kb on - strand, within AO353_21755 at 4768.553 kb on - strand, within AO353_21755 at 4768.553 kb on - strand, within AO353_21755 at 4768.800 kb on + strand, within AO353_21755 at 4768.800 kb on + strand at 4768.842 kb on + strand, within AO353_21755 at 4768.842 kb on + strand, within AO353_21755 at 4768.842 kb on + strand, within AO353_21755 at 4768.842 kb on + strand, within AO353_21755 at 4768.843 kb on - strand, within AO353_21755 at 4768.843 kb on - strand, within AO353_21755 at 4768.843 kb on - strand, within AO353_21755 at 4768.843 kb on - strand, within AO353_21755 at 4768.887 kb on + strand, within AO353_21755 at 4768.887 kb on + strand, within AO353_21755 at 4768.887 kb on + strand, within AO353_21755 at 4768.887 kb on + strand, within AO353_21755 at 4768.887 kb on + strand, within AO353_21755 at 4768.950 kb on + strand, within AO353_21755 at 4768.950 kb on + strand, within AO353_21755 at 4768.951 kb on - strand, within AO353_21755 at 4768.951 kb on - strand, within AO353_21755 at 4769.025 kb on + strand, within AO353_21755 at 4769.067 kb on + strand, within AO353_21755 at 4769.068 kb on - strand, within AO353_21755 at 4769.068 kb on - strand, within AO353_21755 at 4769.209 kb on - strand, within AO353_21755 at 4769.209 kb on - strand, within AO353_21755 at 4769.277 kb on + strand, within AO353_21755 at 4769.278 kb on - strand, within AO353_21755 at 4769.278 kb on - strand, within AO353_21755 at 4769.355 kb on + strand, within AO353_21755 at 4769.356 kb on - strand, within AO353_21755 at 4769.428 kb on + strand, within AO353_21755 at 4769.428 kb on + strand, within AO353_21755 at 4769.640 kb on + strand, within AO353_21755 at 4769.641 kb on - strand, within AO353_21755 at 4769.707 kb on - strand, within AO353_21755 at 4769.707 kb on - strand, within AO353_21755 at 4769.726 kb on + strand, within AO353_21755 at 4769.726 kb on + strand, within AO353_21755 at 4769.738 kb on - strand, within AO353_21755 at 4769.739 kb on + strand, within AO353_21755 at 4769.739 kb on + strand, within AO353_21755 at 4769.739 kb on + strand, within AO353_21755 at 4769.739 kb on + strand, within AO353_21755 at 4769.739 kb on + strand, within AO353_21755 at 4769.739 kb on + strand, within AO353_21755 at 4769.739 kb on + strand, within AO353_21755 at 4769.740 kb on - strand, within AO353_21755 at 4769.740 kb on - strand, within AO353_21755 at 4769.740 kb on - strand, within AO353_21755 at 4769.740 kb on - strand, within AO353_21755 at 4769.740 kb on - strand, within AO353_21755 at 4769.844 kb on + strand at 4769.844 kb on + strand at 4769.844 kb on + strand at 4769.845 kb on - strand at 4769.845 kb on - strand at 4770.049 kb on + strand at 4770.049 kb on + strand at 4770.050 kb on - strand at 4770.050 kb on - strand at 4770.050 kb on - strand at 4770.050 kb on - strand at 4770.050 kb on - strand at 4770.053 kb on + strand at 4770.053 kb on + strand at 4770.053 kb on + strand at 4770.054 kb on - strand at 4770.054 kb on - strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.071 kb on + strand at 4770.072 kb on - strand at 4770.072 kb on - strand at 4770.072 kb on - strand at 4770.072 kb on - strand at 4770.072 kb on - strand at 4770.072 kb on - strand at 4770.072 kb on - strand at 4770.074 kb on + strand at 4770.074 kb on + strand at 4770.074 kb on + strand at 4770.075 kb on - strand at 4770.075 kb on - strand at 4770.075 kb on - strand at 4770.075 kb on - strand at 4770.075 kb on - strand at 4770.075 kb on - strand at 4770.186 kb on + strand at 4770.187 kb on - strand at 4770.187 kb on - strand at 4770.187 kb on - strand at 4770.187 kb on - strand at 4770.571 kb on + strand, within AO353_21760 at 4770.656 kb on + strand, within AO353_21760 at 4770.656 kb on + strand, within AO353_21760 at 4770.656 kb on + strand, within AO353_21760 at 4770.656 kb on + strand, within AO353_21760 at 4770.656 kb on + strand, within AO353_21760 at 4770.656 kb on + strand, within AO353_21760 at 4770.657 kb on - strand, within AO353_21760 at 4770.657 kb on - strand, within AO353_21760 at 4770.657 kb on - strand, within AO353_21760 at 4770.657 kb on - strand, within AO353_21760 at 4770.657 kb on - strand, within AO353_21760 at 4770.657 kb on - strand, within AO353_21760 at 4770.658 kb on + strand, within AO353_21760 at 4770.658 kb on + strand, within AO353_21760 at 4770.658 kb on + strand, within AO353_21760 at 4770.659 kb on - strand, within AO353_21760 at 4770.659 kb on - strand, within AO353_21760 at 4770.659 kb on - strand, within AO353_21760 at 4770.659 kb on - strand, within AO353_21760 at 4770.664 kb on + strand, within AO353_21760
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 7.5 vol% remove 4,766,485 - AO353_21745 0.31 -0.6 4,766,485 - AO353_21745 0.31 +0.2 4,766,527 - AO353_21745 0.35 +1.3 4,766,604 + AO353_21745 0.44 -0.2 4,766,616 + AO353_21745 0.45 -1.8 4,766,616 + AO353_21745 0.45 -1.2 4,766,616 + AO353_21745 0.45 +0.7 4,766,617 - +0.4 4,766,617 - AO353_21745 0.45 +0.2 4,766,617 - +1.0 4,766,617 - AO353_21745 0.45 +1.2 4,766,617 - AO353_21745 0.45 +0.1 4,766,617 - AO353_21745 0.45 -1.6 4,766,660 + AO353_21745 0.50 +0.6 4,766,728 - AO353_21745 0.57 -0.9 4,766,728 - AO353_21745 0.57 +0.4 4,766,790 + AO353_21745 0.63 -0.2 4,766,790 + AO353_21745 0.63 +0.4 4,766,791 - AO353_21745 0.64 +0.1 4,766,887 + AO353_21745 0.74 +0.4 4,767,021 + AO353_21745 0.88 +0.7 4,767,022 - AO353_21745 0.88 -0.9 4,767,166 + -0.5 4,767,325 + AO353_21750 0.61 +0.1 4,767,325 + AO353_21750 0.61 -0.8 4,767,326 - -0.2 4,767,326 - AO353_21750 0.62 +0.2 4,767,326 - AO353_21750 0.62 -0.1 4,767,366 - AO353_21750 0.76 +0.0 4,767,366 - AO353_21750 0.76 -0.9 4,767,441 + -1.1 4,767,441 + -0.3 4,767,441 + -0.7 4,767,441 + -0.4 4,767,442 - -0.2 4,767,442 - -1.4 4,767,442 - +0.1 4,767,474 + -0.1 4,767,475 - +0.1 4,767,475 - -1.3 4,767,620 + -0.2 4,767,621 - -1.5 4,767,621 - -0.1 4,767,778 - AO353_21755 0.12 -0.9 4,767,930 + AO353_21755 0.18 -0.8 4,767,931 - AO353_21755 0.18 -2.3 4,767,931 - AO353_21755 0.18 +0.0 4,767,931 - AO353_21755 0.18 -0.7 4,768,006 - AO353_21755 0.21 -0.6 4,768,006 - AO353_21755 0.21 -1.6 4,768,006 - AO353_21755 0.21 -0.1 4,768,006 - AO353_21755 0.21 -1.4 4,768,131 + AO353_21755 0.25 -0.5 4,768,131 + AO353_21755 0.25 +1.0 4,768,131 + AO353_21755 0.25 -0.2 4,768,132 - AO353_21755 0.25 -2.1 4,768,132 - AO353_21755 0.25 -0.6 4,768,132 - AO353_21755 0.25 -1.1 4,768,132 - AO353_21755 0.25 -0.2 4,768,183 - AO353_21755 0.28 +1.0 4,768,183 - AO353_21755 0.28 -0.6 4,768,183 - AO353_21755 0.28 -1.9 4,768,187 - AO353_21755 0.28 -0.6 4,768,187 - AO353_21755 0.28 -1.7 4,768,187 - AO353_21755 0.28 -1.6 4,768,187 - AO353_21755 0.28 -1.2 4,768,187 - AO353_21755 0.28 +0.2 4,768,187 - AO353_21755 0.28 +0.4 4,768,328 + AO353_21755 0.33 +0.1 4,768,328 + AO353_21755 0.33 +2.0 4,768,328 + AO353_21755 0.33 -1.2 4,768,328 + AO353_21755 0.33 -0.8 4,768,328 + AO353_21755 0.33 -2.1 4,768,328 + AO353_21755 0.33 -1.2 4,768,328 + AO353_21755 0.33 -1.2 4,768,328 + AO353_21755 0.33 -1.3 4,768,328 + AO353_21755 0.33 -1.6 4,768,329 - AO353_21755 0.33 +0.1 4,768,329 - AO353_21755 0.33 -0.7 4,768,329 - AO353_21755 0.33 -0.2 4,768,329 - AO353_21755 0.33 -0.6 4,768,329 - AO353_21755 0.33 -1.2 4,768,329 - AO353_21755 0.33 -0.4 4,768,329 - AO353_21755 0.33 -0.2 4,768,330 + AO353_21755 0.33 -0.1 4,768,331 - AO353_21755 0.33 +0.4 4,768,524 + AO353_21755 0.41 +0.2 4,768,525 - AO353_21755 0.41 +0.6 4,768,525 - AO353_21755 0.41 -1.1 4,768,525 - AO353_21755 0.41 -0.5 4,768,525 - AO353_21755 0.41 -0.0 4,768,553 - AO353_21755 0.42 +0.2 4,768,553 - AO353_21755 0.42 +2.1 4,768,800 + AO353_21755 0.52 -0.3 4,768,800 + +3.0 4,768,842 + AO353_21755 0.53 -1.6 4,768,842 + AO353_21755 0.53 -0.9 4,768,842 + AO353_21755 0.53 +0.8 4,768,842 + AO353_21755 0.53 +0.2 4,768,843 - AO353_21755 0.54 -2.1 4,768,843 - AO353_21755 0.54 +0.3 4,768,843 - AO353_21755 0.54 -0.8 4,768,843 - AO353_21755 0.54 -0.2 4,768,887 + AO353_21755 0.55 -1.2 4,768,887 + AO353_21755 0.55 +0.4 4,768,887 + AO353_21755 0.55 -0.4 4,768,887 + AO353_21755 0.55 -0.3 4,768,887 + AO353_21755 0.55 +0.5 4,768,950 + AO353_21755 0.58 -0.4 4,768,950 + AO353_21755 0.58 -0.5 4,768,951 - AO353_21755 0.58 -0.5 4,768,951 - AO353_21755 0.58 +0.7 4,769,025 + AO353_21755 0.61 -0.7 4,769,067 + AO353_21755 0.62 -0.6 4,769,068 - AO353_21755 0.62 -0.3 4,769,068 - AO353_21755 0.62 -0.3 4,769,209 - AO353_21755 0.68 -0.1 4,769,209 - AO353_21755 0.68 -0.8 4,769,277 + AO353_21755 0.71 +0.5 4,769,278 - AO353_21755 0.71 -0.9 4,769,278 - AO353_21755 0.71 -0.8 4,769,355 + AO353_21755 0.74 +1.2 4,769,356 - AO353_21755 0.74 +0.2 4,769,428 + AO353_21755 0.77 -1.2 4,769,428 + AO353_21755 0.77 +0.2 4,769,640 + AO353_21755 0.85 -0.9 4,769,641 - AO353_21755 0.85 -0.3 4,769,707 - AO353_21755 0.88 +0.1 4,769,707 - AO353_21755 0.88 -1.3 4,769,726 + AO353_21755 0.88 -2.0 4,769,726 + AO353_21755 0.88 +0.5 4,769,738 - AO353_21755 0.89 -0.3 4,769,739 + AO353_21755 0.89 +0.7 4,769,739 + AO353_21755 0.89 +1.8 4,769,739 + AO353_21755 0.89 -0.5 4,769,739 + AO353_21755 0.89 +0.0 4,769,739 + AO353_21755 0.89 -0.5 4,769,739 + AO353_21755 0.89 -1.1 4,769,739 + AO353_21755 0.89 +0.7 4,769,740 - AO353_21755 0.89 +0.4 4,769,740 - AO353_21755 0.89 -0.8 4,769,740 - AO353_21755 0.89 -1.2 4,769,740 - AO353_21755 0.89 -0.9 4,769,740 - AO353_21755 0.89 -1.1 4,769,844 + -1.2 4,769,844 + +0.4 4,769,844 + -1.4 4,769,845 - -1.4 4,769,845 - +0.5 4,770,049 + +0.4 4,770,049 + -0.2 4,770,050 - -0.7 4,770,050 - +0.9 4,770,050 - +1.0 4,770,050 - -0.0 4,770,050 - +0.8 4,770,053 + -1.4 4,770,053 + -0.8 4,770,053 + +1.2 4,770,054 - +1.0 4,770,054 - +0.2 4,770,071 + -0.6 4,770,071 + -1.1 4,770,071 + +3.7 4,770,071 + -0.8 4,770,071 + -0.6 4,770,071 + +0.3 4,770,071 + +0.1 4,770,071 + +0.4 4,770,071 + +0.2 4,770,071 + +0.6 4,770,072 - -0.5 4,770,072 - -0.3 4,770,072 - -0.7 4,770,072 - +0.5 4,770,072 - +0.4 4,770,072 - +2.0 4,770,072 - +1.0 4,770,074 + -0.2 4,770,074 + -1.1 4,770,074 + +0.4 4,770,075 - +0.4 4,770,075 - +0.4 4,770,075 - -1.3 4,770,075 - -0.9 4,770,075 - -0.6 4,770,075 - -1.3 4,770,186 + +0.4 4,770,187 - +0.6 4,770,187 - +0.4 4,770,187 - -1.4 4,770,187 - +0.0 4,770,571 + AO353_21760 0.36 -0.6 4,770,656 + AO353_21760 0.44 +0.1 4,770,656 + AO353_21760 0.44 +0.9 4,770,656 + AO353_21760 0.44 +0.8 4,770,656 + AO353_21760 0.44 -0.7 4,770,656 + AO353_21760 0.44 +0.1 4,770,656 + AO353_21760 0.44 +0.2 4,770,657 - AO353_21760 0.44 +0.4 4,770,657 - AO353_21760 0.44 -0.6 4,770,657 - AO353_21760 0.44 +3.4 4,770,657 - AO353_21760 0.44 -1.9 4,770,657 - AO353_21760 0.44 +0.2 4,770,657 - AO353_21760 0.44 -0.8 4,770,658 + AO353_21760 0.44 +0.3 4,770,658 + AO353_21760 0.44 +0.0 4,770,658 + AO353_21760 0.44 -0.8 4,770,659 - AO353_21760 0.44 +2.0 4,770,659 - AO353_21760 0.44 -0.4 4,770,659 - AO353_21760 0.44 +1.3 4,770,659 - AO353_21760 0.44 -1.5 4,770,664 + AO353_21760 0.44 +0.6
Or see this region's nucleotide sequence