Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21215 and AO353_21220 overlap by 1 nucleotides AO353_21220 and AO353_21225 are separated by 131 nucleotides
AO353_21215: AO353_21215 - glycosyl transferase, at 4,639,385 to 4,640,572
_21215
AO353_21220: AO353_21220 - glycosyl transferase, at 4,640,572 to 4,641,324
_21220
AO353_21225: AO353_21225 - hypothetical protein, at 4,641,456 to 4,641,956
_21225
Position (kb)
4641
4642 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4640.474 kb on + strand at 4640.474 kb on + strand at 4640.475 kb on - strand at 4640.475 kb on - strand at 4640.475 kb on - strand at 4640.475 kb on - strand at 4640.475 kb on - strand at 4640.503 kb on - strand at 4640.510 kb on + strand at 4640.510 kb on + strand at 4640.510 kb on + strand at 4640.515 kb on - strand at 4640.570 kb on + strand at 4640.570 kb on + strand at 4640.570 kb on + strand at 4640.570 kb on + strand at 4640.570 kb on + strand at 4640.570 kb on + strand at 4640.571 kb on - strand at 4640.571 kb on - strand at 4640.693 kb on + strand, within AO353_21220 at 4640.693 kb on + strand, within AO353_21220 at 4640.693 kb on + strand, within AO353_21220 at 4640.694 kb on - strand, within AO353_21220 at 4640.694 kb on - strand, within AO353_21220 at 4640.746 kb on + strand, within AO353_21220 at 4640.747 kb on - strand, within AO353_21220 at 4640.749 kb on + strand, within AO353_21220 at 4640.749 kb on + strand, within AO353_21220 at 4640.749 kb on + strand, within AO353_21220 at 4640.749 kb on + strand, within AO353_21220 at 4640.749 kb on + strand, within AO353_21220 at 4640.749 kb on + strand, within AO353_21220 at 4640.750 kb on - strand, within AO353_21220 at 4640.750 kb on - strand, within AO353_21220 at 4640.750 kb on - strand, within AO353_21220 at 4640.750 kb on - strand, within AO353_21220 at 4640.752 kb on - strand, within AO353_21220 at 4640.777 kb on + strand, within AO353_21220 at 4640.777 kb on + strand, within AO353_21220 at 4640.777 kb on + strand, within AO353_21220 at 4640.778 kb on - strand, within AO353_21220 at 4640.778 kb on - strand, within AO353_21220 at 4640.837 kb on + strand, within AO353_21220 at 4640.841 kb on + strand, within AO353_21220 at 4640.842 kb on - strand, within AO353_21220 at 4640.842 kb on - strand, within AO353_21220 at 4640.842 kb on - strand, within AO353_21220 at 4640.870 kb on + strand, within AO353_21220 at 4640.958 kb on - strand, within AO353_21220 at 4640.972 kb on + strand, within AO353_21220 at 4640.972 kb on + strand, within AO353_21220 at 4640.972 kb on + strand, within AO353_21220 at 4640.972 kb on + strand, within AO353_21220 at 4640.973 kb on - strand, within AO353_21220 at 4640.973 kb on - strand, within AO353_21220 at 4640.973 kb on - strand, within AO353_21220 at 4640.973 kb on - strand at 4640.973 kb on - strand, within AO353_21220 at 4640.973 kb on - strand, within AO353_21220 at 4640.973 kb on - strand, within AO353_21220 at 4641.010 kb on + strand, within AO353_21220 at 4641.010 kb on + strand, within AO353_21220 at 4641.010 kb on + strand, within AO353_21220 at 4641.010 kb on + strand, within AO353_21220 at 4641.010 kb on + strand, within AO353_21220 at 4641.010 kb on + strand, within AO353_21220 at 4641.011 kb on - strand, within AO353_21220 at 4641.011 kb on - strand, within AO353_21220 at 4641.011 kb on - strand, within AO353_21220 at 4641.011 kb on - strand, within AO353_21220 at 4641.011 kb on - strand, within AO353_21220 at 4641.011 kb on - strand, within AO353_21220 at 4641.011 kb on - strand, within AO353_21220 at 4641.011 kb on - strand, within AO353_21220 at 4641.011 kb on - strand, within AO353_21220 at 4641.011 kb on - strand, within AO353_21220 at 4641.011 kb on - strand, within AO353_21220 at 4641.011 kb on - strand, within AO353_21220 at 4641.011 kb on - strand, within AO353_21220 at 4641.011 kb on - strand, within AO353_21220 at 4641.011 kb on - strand, within AO353_21220 at 4641.011 kb on - strand, within AO353_21220 at 4641.011 kb on - strand, within AO353_21220 at 4641.122 kb on + strand, within AO353_21220 at 4641.123 kb on - strand, within AO353_21220 at 4641.239 kb on + strand, within AO353_21220 at 4641.250 kb on + strand at 4641.250 kb on + strand at 4641.251 kb on - strand at 4641.251 kb on - strand at 4641.251 kb on - strand at 4641.251 kb on - strand at 4641.306 kb on + strand at 4641.306 kb on + strand at 4641.306 kb on + strand at 4641.307 kb on - strand at 4641.307 kb on - strand at 4641.307 kb on - strand at 4641.307 kb on - strand at 4641.307 kb on - strand at 4641.307 kb on - strand at 4641.307 kb on - strand at 4641.312 kb on - strand at 4641.327 kb on + strand at 4641.328 kb on - strand at 4641.328 kb on - strand at 4641.328 kb on - strand at 4641.364 kb on + strand at 4641.364 kb on + strand at 4641.364 kb on + strand at 4641.364 kb on + strand at 4641.365 kb on - strand at 4641.442 kb on + strand at 4641.442 kb on + strand at 4641.442 kb on + strand at 4641.442 kb on + strand at 4641.442 kb on + strand at 4641.442 kb on + strand at 4641.442 kb on + strand at 4641.443 kb on - strand at 4641.443 kb on - strand at 4641.454 kb on - strand at 4641.454 kb on - strand at 4641.454 kb on - strand at 4641.454 kb on - strand at 4641.454 kb on - strand at 4641.457 kb on + strand at 4641.457 kb on + strand at 4641.457 kb on + strand at 4641.457 kb on + strand at 4641.458 kb on - strand at 4641.458 kb on - strand at 4641.458 kb on - strand at 4641.485 kb on + strand at 4641.510 kb on + strand, within AO353_21225 at 4641.539 kb on + strand, within AO353_21225 at 4641.540 kb on - strand, within AO353_21225 at 4641.554 kb on + strand, within AO353_21225 at 4641.554 kb on + strand, within AO353_21225 at 4641.554 kb on + strand, within AO353_21225 at 4641.554 kb on + strand, within AO353_21225 at 4641.555 kb on - strand, within AO353_21225 at 4641.555 kb on - strand, within AO353_21225 at 4641.556 kb on + strand, within AO353_21225 at 4641.556 kb on + strand, within AO353_21225 at 4641.557 kb on - strand, within AO353_21225 at 4641.557 kb on - strand, within AO353_21225 at 4641.557 kb on - strand, within AO353_21225 at 4641.557 kb on - strand, within AO353_21225 at 4641.582 kb on + strand, within AO353_21225 at 4641.582 kb on + strand, within AO353_21225 at 4641.582 kb on + strand, within AO353_21225 at 4641.582 kb on + strand, within AO353_21225 at 4641.582 kb on + strand, within AO353_21225 at 4641.582 kb on + strand, within AO353_21225 at 4641.582 kb on + strand, within AO353_21225 at 4641.582 kb on + strand, within AO353_21225 at 4641.582 kb on + strand, within AO353_21225 at 4641.582 kb on + strand, within AO353_21225 at 4641.583 kb on - strand, within AO353_21225 at 4641.583 kb on - strand, within AO353_21225 at 4641.583 kb on - strand, within AO353_21225 at 4641.583 kb on - strand, within AO353_21225 at 4641.583 kb on - strand, within AO353_21225 at 4641.583 kb on - strand, within AO353_21225 at 4641.583 kb on - strand, within AO353_21225 at 4641.583 kb on - strand at 4641.583 kb on - strand, within AO353_21225 at 4641.583 kb on - strand, within AO353_21225 at 4641.583 kb on - strand, within AO353_21225 at 4641.583 kb on - strand, within AO353_21225 at 4641.583 kb on - strand, within AO353_21225 at 4641.584 kb on + strand, within AO353_21225 at 4641.585 kb on - strand, within AO353_21225 at 4641.657 kb on - strand, within AO353_21225 at 4641.828 kb on + strand, within AO353_21225 at 4641.858 kb on - strand, within AO353_21225 at 4641.866 kb on - strand, within AO353_21225 at 4641.866 kb on - strand, within AO353_21225 at 4641.866 kb on - strand, within AO353_21225 at 4641.866 kb on - strand, within AO353_21225 at 4641.896 kb on + strand, within AO353_21225 at 4641.897 kb on - strand, within AO353_21225 at 4641.915 kb on + strand at 4641.915 kb on + strand at 4641.915 kb on + strand at 4641.916 kb on - strand at 4641.918 kb on + strand at 4641.918 kb on + strand at 4641.935 kb on + strand at 4641.935 kb on + strand at 4641.938 kb on + strand at 4641.957 kb on - strand at 4641.957 kb on - strand at 4641.982 kb on + strand at 4641.982 kb on + strand at 4641.982 kb on + strand at 4641.983 kb on - strand at 4642.028 kb on + strand at 4642.028 kb on + strand at 4642.028 kb on + strand at 4642.029 kb on - strand at 4642.029 kb on - strand at 4642.029 kb on - strand at 4642.029 kb on - strand at 4642.031 kb on + strand at 4642.032 kb on - strand at 4642.075 kb on + strand at 4642.150 kb on - strand at 4642.162 kb on + strand at 4642.163 kb on - strand at 4642.163 kb on - strand at 4642.339 kb on + strand at 4642.340 kb on - strand at 4642.374 kb on + strand at 4642.374 kb on + strand at 4642.584 kb on + strand at 4642.584 kb on + strand at 4642.584 kb on + strand at 4642.584 kb on + strand at 4642.584 kb on + strand at 4642.584 kb on + strand at 4642.584 kb on + strand at 4642.584 kb on + strand at 4642.585 kb on - strand at 4642.585 kb on - strand at 4642.585 kb on - strand at 4642.585 kb on - strand at 4642.585 kb on - strand at 4642.590 kb on + strand at 4642.601 kb on + strand at 4642.601 kb on + strand at 4642.601 kb on + strand at 4642.602 kb on - strand at 4642.633 kb on + strand at 4642.633 kb on + strand at 4642.633 kb on + strand at 4642.634 kb on - strand at 4642.634 kb on - strand at 4642.634 kb on - strand at 4642.654 kb on + strand at 4642.654 kb on + strand at 4642.709 kb on - strand at 4642.709 kb on - strand at 4642.789 kb on + strand at 4642.802 kb on + strand at 4642.802 kb on + strand at 4642.802 kb on + strand at 4642.802 kb on + strand at 4642.803 kb on - strand at 4642.803 kb on - strand at 4642.826 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 7.5 vol% remove 4,640,474 + -0.5 4,640,474 + -0.1 4,640,475 - -1.1 4,640,475 - -2.0 4,640,475 - +0.7 4,640,475 - -0.7 4,640,475 - -1.3 4,640,503 - -1.1 4,640,510 + +0.2 4,640,510 + -0.4 4,640,510 + +0.1 4,640,515 - +2.0 4,640,570 + -0.3 4,640,570 + +1.1 4,640,570 + -0.4 4,640,570 + +0.6 4,640,570 + +0.5 4,640,570 + -0.1 4,640,571 - -2.0 4,640,571 - -0.5 4,640,693 + AO353_21220 0.16 +1.4 4,640,693 + AO353_21220 0.16 +0.4 4,640,693 + AO353_21220 0.16 -0.0 4,640,694 - AO353_21220 0.16 -0.4 4,640,694 - AO353_21220 0.16 -0.1 4,640,746 + AO353_21220 0.23 +0.7 4,640,747 - AO353_21220 0.23 +0.6 4,640,749 + AO353_21220 0.24 -0.2 4,640,749 + AO353_21220 0.24 -0.3 4,640,749 + AO353_21220 0.24 -0.4 4,640,749 + AO353_21220 0.24 +1.9 4,640,749 + AO353_21220 0.24 +1.1 4,640,749 + AO353_21220 0.24 +0.3 4,640,750 - AO353_21220 0.24 -0.7 4,640,750 - AO353_21220 0.24 +2.4 4,640,750 - AO353_21220 0.24 +0.4 4,640,750 - AO353_21220 0.24 +0.6 4,640,752 - AO353_21220 0.24 -1.5 4,640,777 + AO353_21220 0.27 +0.0 4,640,777 + AO353_21220 0.27 +0.1 4,640,777 + AO353_21220 0.27 -1.6 4,640,778 - AO353_21220 0.27 +1.4 4,640,778 - AO353_21220 0.27 -0.1 4,640,837 + AO353_21220 0.35 -0.4 4,640,841 + AO353_21220 0.36 +0.5 4,640,842 - AO353_21220 0.36 -0.7 4,640,842 - AO353_21220 0.36 +0.3 4,640,842 - AO353_21220 0.36 -1.1 4,640,870 + AO353_21220 0.40 +0.4 4,640,958 - AO353_21220 0.51 -1.8 4,640,972 + AO353_21220 0.53 -0.9 4,640,972 + AO353_21220 0.53 +0.4 4,640,972 + AO353_21220 0.53 +0.7 4,640,972 + AO353_21220 0.53 +1.4 4,640,973 - AO353_21220 0.53 +0.1 4,640,973 - AO353_21220 0.53 -0.3 4,640,973 - AO353_21220 0.53 +0.4 4,640,973 - +1.0 4,640,973 - AO353_21220 0.53 -0.2 4,640,973 - AO353_21220 0.53 +1.2 4,640,973 - AO353_21220 0.53 -1.5 4,641,010 + AO353_21220 0.58 +0.5 4,641,010 + AO353_21220 0.58 -0.1 4,641,010 + AO353_21220 0.58 -2.0 4,641,010 + AO353_21220 0.58 +0.9 4,641,010 + AO353_21220 0.58 +0.4 4,641,010 + AO353_21220 0.58 -2.0 4,641,011 - AO353_21220 0.58 -0.1 4,641,011 - AO353_21220 0.58 -0.2 4,641,011 - AO353_21220 0.58 +0.4 4,641,011 - AO353_21220 0.58 -0.4 4,641,011 - AO353_21220 0.58 -1.4 4,641,011 - AO353_21220 0.58 +0.3 4,641,011 - AO353_21220 0.58 -0.9 4,641,011 - AO353_21220 0.58 +0.5 4,641,011 - AO353_21220 0.58 +0.4 4,641,011 - AO353_21220 0.58 -0.0 4,641,011 - AO353_21220 0.58 -2.3 4,641,011 - AO353_21220 0.58 -1.8 4,641,011 - AO353_21220 0.58 +0.1 4,641,011 - AO353_21220 0.58 +0.9 4,641,011 - AO353_21220 0.58 +1.9 4,641,011 - AO353_21220 0.58 -0.1 4,641,011 - AO353_21220 0.58 +0.9 4,641,122 + AO353_21220 0.73 +3.0 4,641,123 - AO353_21220 0.73 +2.4 4,641,239 + AO353_21220 0.89 -0.7 4,641,250 + +0.3 4,641,250 + -0.1 4,641,251 - -0.8 4,641,251 - -0.4 4,641,251 - +0.3 4,641,251 - +0.7 4,641,306 + +0.2 4,641,306 + -0.8 4,641,306 + +0.4 4,641,307 - -0.6 4,641,307 - -0.2 4,641,307 - +0.0 4,641,307 - +0.1 4,641,307 - -0.4 4,641,307 - -0.7 4,641,307 - +0.9 4,641,312 - -1.6 4,641,327 + -0.4 4,641,328 - -0.5 4,641,328 - -0.4 4,641,328 - +1.7 4,641,364 + +0.6 4,641,364 + -0.0 4,641,364 + -0.7 4,641,364 + +1.2 4,641,365 - -0.7 4,641,442 + +0.1 4,641,442 + +0.1 4,641,442 + -0.4 4,641,442 + +0.6 4,641,442 + -0.5 4,641,442 + +1.3 4,641,442 + -0.9 4,641,443 - -0.1 4,641,443 - -1.0 4,641,454 - -0.3 4,641,454 - -0.6 4,641,454 - +0.7 4,641,454 - -1.9 4,641,454 - -0.4 4,641,457 + -0.6 4,641,457 + +0.1 4,641,457 + -0.6 4,641,457 + +0.6 4,641,458 - -0.1 4,641,458 - +1.0 4,641,458 - +1.9 4,641,485 + -1.2 4,641,510 + AO353_21225 0.11 +0.9 4,641,539 + AO353_21225 0.17 +0.0 4,641,540 - AO353_21225 0.17 -0.1 4,641,554 + AO353_21225 0.20 -0.6 4,641,554 + AO353_21225 0.20 -0.3 4,641,554 + AO353_21225 0.20 -1.5 4,641,554 + AO353_21225 0.20 +1.1 4,641,555 - AO353_21225 0.20 -0.6 4,641,555 - AO353_21225 0.20 +0.6 4,641,556 + AO353_21225 0.20 -0.4 4,641,556 + AO353_21225 0.20 +0.1 4,641,557 - AO353_21225 0.20 -2.5 4,641,557 - AO353_21225 0.20 -1.3 4,641,557 - AO353_21225 0.20 -2.1 4,641,557 - AO353_21225 0.20 +0.2 4,641,582 + AO353_21225 0.25 +1.2 4,641,582 + AO353_21225 0.25 -0.8 4,641,582 + AO353_21225 0.25 -0.3 4,641,582 + AO353_21225 0.25 -0.1 4,641,582 + AO353_21225 0.25 +0.2 4,641,582 + AO353_21225 0.25 -0.4 4,641,582 + AO353_21225 0.25 -0.1 4,641,582 + AO353_21225 0.25 +1.4 4,641,582 + AO353_21225 0.25 -0.1 4,641,582 + AO353_21225 0.25 +0.3 4,641,583 - AO353_21225 0.25 -1.4 4,641,583 - AO353_21225 0.25 -3.1 4,641,583 - AO353_21225 0.25 -0.4 4,641,583 - AO353_21225 0.25 +0.2 4,641,583 - AO353_21225 0.25 -1.1 4,641,583 - AO353_21225 0.25 -0.9 4,641,583 - AO353_21225 0.25 -0.1 4,641,583 - -0.6 4,641,583 - AO353_21225 0.25 -0.6 4,641,583 - AO353_21225 0.25 -1.4 4,641,583 - AO353_21225 0.25 +0.7 4,641,583 - AO353_21225 0.25 -2.6 4,641,583 - AO353_21225 0.25 +0.3 4,641,584 + AO353_21225 0.26 -1.0 4,641,585 - AO353_21225 0.26 -1.7 4,641,657 - AO353_21225 0.40 -0.1 4,641,828 + AO353_21225 0.74 -0.1 4,641,858 - AO353_21225 0.80 +0.3 4,641,866 - AO353_21225 0.82 +1.7 4,641,866 - AO353_21225 0.82 +3.2 4,641,866 - AO353_21225 0.82 -1.0 4,641,866 - AO353_21225 0.82 -2.0 4,641,896 + AO353_21225 0.88 +0.0 4,641,897 - AO353_21225 0.88 -0.9 4,641,915 + -0.4 4,641,915 + +0.4 4,641,915 + +1.9 4,641,916 - -0.9 4,641,918 + +0.4 4,641,918 + +0.5 4,641,935 + -0.6 4,641,935 + -0.1 4,641,938 + +0.0 4,641,957 - +0.4 4,641,957 - -0.5 4,641,982 + +0.6 4,641,982 + +0.5 4,641,982 + +0.7 4,641,983 - -0.6 4,642,028 + +1.1 4,642,028 + -0.3 4,642,028 + +0.1 4,642,029 - +1.4 4,642,029 - +0.4 4,642,029 - -0.3 4,642,029 - -1.3 4,642,031 + +0.6 4,642,032 - +0.8 4,642,075 + +0.1 4,642,150 - -1.6 4,642,162 + -0.3 4,642,163 - +0.7 4,642,163 - -0.1 4,642,339 + +0.2 4,642,340 - +0.0 4,642,374 + -0.0 4,642,374 + +1.0 4,642,584 + +0.6 4,642,584 + -0.6 4,642,584 + +0.1 4,642,584 + -0.1 4,642,584 + -1.6 4,642,584 + -0.6 4,642,584 + -2.0 4,642,584 + -0.4 4,642,585 - +1.1 4,642,585 - +0.4 4,642,585 - -0.5 4,642,585 - +0.3 4,642,585 - +1.2 4,642,590 + -0.2 4,642,601 + +0.4 4,642,601 + +0.4 4,642,601 + -0.3 4,642,602 - -0.2 4,642,633 + -1.1 4,642,633 + +0.4 4,642,633 + -2.6 4,642,634 - +0.2 4,642,634 - +0.7 4,642,634 - -1.3 4,642,654 + -0.9 4,642,654 + -0.1 4,642,709 - -1.1 4,642,709 - +0.1 4,642,789 + +0.8 4,642,802 + +0.2 4,642,802 + -1.0 4,642,802 + -0.0 4,642,802 + +0.6 4,642,803 - +0.7 4,642,803 - +0.8 4,642,826 - +0.6
Or see this region's nucleotide sequence