Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_20500 and AO353_20505 are separated by 1 nucleotides AO353_20505 and AO353_20510 are separated by 190 nucleotides AO353_20510 and AO353_20515 are separated by 10 nucleotides
AO353_20500: AO353_20500 - ADP-ribose pyrophosphatase, at 4,501,195 to 4,501,902
_20500
AO353_20505: AO353_20505 - cytidyltransferase, at 4,501,904 to 4,502,449
_20505
AO353_20510: AO353_20510 - amidase, at 4,502,640 to 4,503,287
_20510
AO353_20515: AO353_20515 - nicotinate phosphoribosyltransferase, at 4,503,298 to 4,504,527
_20515
Position (kb)
4502
4503
4504 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4501.924 kb on - strand at 4501.933 kb on - strand at 4501.933 kb on - strand at 4501.933 kb on - strand at 4501.933 kb on - strand at 4501.933 kb on - strand at 4501.933 kb on - strand at 4502.079 kb on + strand, within AO353_20505 at 4502.134 kb on + strand, within AO353_20505 at 4502.178 kb on + strand, within AO353_20505 at 4502.178 kb on + strand, within AO353_20505 at 4502.178 kb on + strand, within AO353_20505 at 4502.179 kb on - strand, within AO353_20505 at 4502.179 kb on - strand, within AO353_20505 at 4502.179 kb on - strand, within AO353_20505 at 4502.179 kb on - strand, within AO353_20505 at 4502.184 kb on + strand, within AO353_20505 at 4502.184 kb on + strand, within AO353_20505 at 4502.185 kb on - strand, within AO353_20505 at 4502.185 kb on - strand, within AO353_20505 at 4502.185 kb on - strand, within AO353_20505 at 4502.185 kb on - strand, within AO353_20505 at 4502.185 kb on - strand, within AO353_20505 at 4502.261 kb on + strand, within AO353_20505 at 4502.261 kb on + strand, within AO353_20505 at 4502.261 kb on + strand, within AO353_20505 at 4502.262 kb on - strand, within AO353_20505 at 4502.262 kb on - strand, within AO353_20505 at 4502.304 kb on + strand, within AO353_20505 at 4502.305 kb on - strand, within AO353_20505 at 4502.438 kb on + strand at 4502.439 kb on - strand at 4502.439 kb on - strand at 4502.445 kb on + strand at 4502.445 kb on + strand at 4502.446 kb on - strand at 4502.446 kb on - strand at 4502.446 kb on - strand at 4502.446 kb on - strand at 4502.446 kb on - strand at 4502.446 kb on - strand at 4502.446 kb on - strand at 4502.479 kb on + strand at 4502.532 kb on + strand at 4502.542 kb on - strand at 4502.542 kb on - strand at 4502.542 kb on - strand at 4502.956 kb on - strand, within AO353_20510 at 4502.962 kb on - strand, within AO353_20510 at 4503.013 kb on - strand, within AO353_20510 at 4503.054 kb on + strand, within AO353_20510 at 4503.315 kb on + strand at 4503.355 kb on + strand at 4503.355 kb on + strand at 4503.355 kb on + strand at 4503.355 kb on + strand at 4503.356 kb on - strand at 4503.356 kb on - strand at 4503.356 kb on - strand at 4503.356 kb on - strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.358 kb on + strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.359 kb on - strand at 4503.415 kb on + strand at 4503.415 kb on + strand at 4503.534 kb on + strand, within AO353_20515 at 4503.535 kb on - strand, within AO353_20515 at 4503.535 kb on - strand, within AO353_20515 at 4503.535 kb on - strand, within AO353_20515 at 4503.550 kb on + strand, within AO353_20515 at 4503.550 kb on + strand, within AO353_20515 at 4503.550 kb on + strand, within AO353_20515 at 4503.551 kb on - strand, within AO353_20515 at 4503.551 kb on - strand, within AO353_20515 at 4503.551 kb on - strand, within AO353_20515 at 4503.551 kb on - strand, within AO353_20515 at 4503.604 kb on + strand, within AO353_20515 at 4503.605 kb on - strand, within AO353_20515 at 4503.605 kb on - strand, within AO353_20515 at 4503.727 kb on + strand, within AO353_20515 at 4503.727 kb on + strand, within AO353_20515 at 4503.728 kb on - strand, within AO353_20515 at 4503.766 kb on + strand, within AO353_20515 at 4503.766 kb on + strand, within AO353_20515 at 4503.944 kb on - strand, within AO353_20515 at 4504.060 kb on + strand, within AO353_20515 at 4504.060 kb on + strand, within AO353_20515 at 4504.061 kb on - strand, within AO353_20515 at 4504.132 kb on + strand, within AO353_20515 at 4504.132 kb on + strand, within AO353_20515 at 4504.132 kb on + strand, within AO353_20515 at 4504.132 kb on + strand, within AO353_20515 at 4504.133 kb on - strand, within AO353_20515 at 4504.133 kb on - strand, within AO353_20515 at 4504.147 kb on + strand, within AO353_20515 at 4504.147 kb on + strand, within AO353_20515 at 4504.148 kb on - strand, within AO353_20515 at 4504.148 kb on - strand, within AO353_20515 at 4504.148 kb on - strand, within AO353_20515 at 4504.210 kb on + strand, within AO353_20515 at 4504.210 kb on + strand, within AO353_20515 at 4504.211 kb on - strand, within AO353_20515
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 7.5 vol% remove 4,501,924 - +0.6 4,501,933 - -0.2 4,501,933 - -2.1 4,501,933 - +2.0 4,501,933 - +0.8 4,501,933 - +0.6 4,501,933 - -0.1 4,502,079 + AO353_20505 0.32 +0.7 4,502,134 + AO353_20505 0.42 +1.5 4,502,178 + AO353_20505 0.50 +1.5 4,502,178 + AO353_20505 0.50 -0.2 4,502,178 + AO353_20505 0.50 -1.3 4,502,179 - AO353_20505 0.50 +0.7 4,502,179 - AO353_20505 0.50 -0.1 4,502,179 - AO353_20505 0.50 +0.7 4,502,179 - AO353_20505 0.50 -0.8 4,502,184 + AO353_20505 0.51 +0.3 4,502,184 + AO353_20505 0.51 +0.0 4,502,185 - AO353_20505 0.51 -0.0 4,502,185 - AO353_20505 0.51 +0.5 4,502,185 - AO353_20505 0.51 +0.1 4,502,185 - AO353_20505 0.51 +0.3 4,502,185 - AO353_20505 0.51 -0.5 4,502,261 + AO353_20505 0.65 -0.2 4,502,261 + AO353_20505 0.65 -0.2 4,502,261 + AO353_20505 0.65 +0.7 4,502,262 - AO353_20505 0.66 -0.3 4,502,262 - AO353_20505 0.66 -0.6 4,502,304 + AO353_20505 0.73 +0.7 4,502,305 - AO353_20505 0.73 +1.3 4,502,438 + -2.4 4,502,439 - -0.1 4,502,439 - -0.3 4,502,445 + +1.1 4,502,445 + -0.3 4,502,446 - +0.4 4,502,446 - -1.7 4,502,446 - -0.6 4,502,446 - -0.7 4,502,446 - +0.5 4,502,446 - +1.2 4,502,446 - +2.1 4,502,479 + -0.5 4,502,532 + -1.7 4,502,542 - -0.1 4,502,542 - -0.7 4,502,542 - -0.8 4,502,956 - AO353_20510 0.49 -0.8 4,502,962 - AO353_20510 0.50 -1.1 4,503,013 - AO353_20510 0.58 -0.4 4,503,054 + AO353_20510 0.64 -1.8 4,503,315 + -0.6 4,503,355 + -0.3 4,503,355 + -1.8 4,503,355 + +0.3 4,503,355 + -0.5 4,503,356 - -1.2 4,503,356 - -0.1 4,503,356 - -1.2 4,503,356 - -0.3 4,503,358 + +1.0 4,503,358 + -1.5 4,503,358 + -0.0 4,503,358 + +1.5 4,503,358 + -0.4 4,503,358 + -1.2 4,503,358 + +0.7 4,503,358 + +0.5 4,503,358 + -0.1 4,503,358 + +0.8 4,503,359 - +0.5 4,503,359 - +1.0 4,503,359 - +1.2 4,503,359 - -0.7 4,503,359 - -0.2 4,503,359 - -0.6 4,503,359 - -0.4 4,503,359 - -0.3 4,503,359 - +0.1 4,503,359 - -0.2 4,503,359 - -0.7 4,503,359 - +0.1 4,503,359 - -0.1 4,503,415 + -0.6 4,503,415 + +1.9 4,503,534 + AO353_20515 0.19 +0.6 4,503,535 - AO353_20515 0.19 +0.8 4,503,535 - AO353_20515 0.19 -0.4 4,503,535 - AO353_20515 0.19 -0.3 4,503,550 + AO353_20515 0.20 -0.5 4,503,550 + AO353_20515 0.20 -0.3 4,503,550 + AO353_20515 0.20 -1.8 4,503,551 - AO353_20515 0.21 +0.7 4,503,551 - AO353_20515 0.21 +1.9 4,503,551 - AO353_20515 0.21 -0.4 4,503,551 - AO353_20515 0.21 -1.1 4,503,604 + AO353_20515 0.25 -1.2 4,503,605 - AO353_20515 0.25 -0.3 4,503,605 - AO353_20515 0.25 -0.5 4,503,727 + AO353_20515 0.35 -1.5 4,503,727 + AO353_20515 0.35 -1.5 4,503,728 - AO353_20515 0.35 +0.7 4,503,766 + AO353_20515 0.38 -1.0 4,503,766 + AO353_20515 0.38 -0.5 4,503,944 - AO353_20515 0.53 -0.4 4,504,060 + AO353_20515 0.62 +0.2 4,504,060 + AO353_20515 0.62 +0.5 4,504,061 - AO353_20515 0.62 +1.5 4,504,132 + AO353_20515 0.68 +0.3 4,504,132 + AO353_20515 0.68 -0.0 4,504,132 + AO353_20515 0.68 -0.1 4,504,132 + AO353_20515 0.68 -1.0 4,504,133 - AO353_20515 0.68 -1.5 4,504,133 - AO353_20515 0.68 +1.2 4,504,147 + AO353_20515 0.69 +1.8 4,504,147 + AO353_20515 0.69 -0.4 4,504,148 - AO353_20515 0.69 +1.5 4,504,148 - AO353_20515 0.69 +2.3 4,504,148 - AO353_20515 0.69 -2.1 4,504,210 + AO353_20515 0.74 -0.8 4,504,210 + AO353_20515 0.74 -0.4 4,504,211 - AO353_20515 0.74 -0.3
Or see this region's nucleotide sequence