Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16850 and AO353_16855 are separated by 111 nucleotides AO353_16855 and AO353_16860 are separated by 248 nucleotides AO353_16860 and AO353_16865 are separated by 67 nucleotides
AO353_16850: AO353_16850 - ferredoxin-NADP reductase, at 3,728,725 to 3,729,504
_16850
AO353_16855: AO353_16855 - tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA, at 3,729,616 to 3,730,314
_16855
AO353_16860: AO353_16860 - hypothetical protein, at 3,730,563 to 3,731,030
_16860
AO353_16865: AO353_16865 - RNA-binding protein, at 3,731,098 to 3,731,808
_16865
Position (kb)
3729
3730
3731 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3728.634 kb on + strand at 3728.634 kb on + strand at 3728.649 kb on + strand at 3728.649 kb on + strand at 3728.649 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.680 kb on - strand at 3729.680 kb on - strand at 3729.680 kb on - strand at 3729.680 kb on - strand at 3729.707 kb on + strand, within AO353_16855 at 3729.708 kb on - strand, within AO353_16855 at 3729.810 kb on + strand, within AO353_16855 at 3729.810 kb on + strand, within AO353_16855 at 3729.811 kb on - strand, within AO353_16855 at 3729.917 kb on + strand, within AO353_16855 at 3729.917 kb on + strand, within AO353_16855 at 3729.918 kb on - strand, within AO353_16855 at 3729.918 kb on - strand, within AO353_16855 at 3729.942 kb on + strand, within AO353_16855 at 3729.942 kb on + strand, within AO353_16855 at 3730.071 kb on + strand, within AO353_16855 at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.350 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.441 kb on - strand at 3730.441 kb on - strand at 3730.441 kb on - strand at 3730.441 kb on - strand at 3730.441 kb on - strand at 3730.630 kb on + strand, within AO353_16860 at 3730.630 kb on + strand at 3730.631 kb on - strand, within AO353_16860 at 3730.875 kb on + strand, within AO353_16860 at 3730.875 kb on + strand, within AO353_16860 at 3730.875 kb on + strand, within AO353_16860 at 3730.876 kb on - strand, within AO353_16860 at 3730.876 kb on - strand, within AO353_16860 at 3730.912 kb on + strand, within AO353_16860 at 3730.912 kb on + strand, within AO353_16860 at 3730.912 kb on + strand, within AO353_16860 at 3730.912 kb on + strand, within AO353_16860 at 3730.912 kb on + strand, within AO353_16860 at 3730.913 kb on - strand, within AO353_16860 at 3730.913 kb on - strand, within AO353_16860 at 3730.913 kb on - strand, within AO353_16860 at 3730.913 kb on - strand, within AO353_16860 at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.997 kb on - strand at 3731.013 kb on + strand at 3731.013 kb on + strand at 3731.013 kb on + strand at 3731.014 kb on - strand at 3731.014 kb on - strand at 3731.014 kb on - strand at 3731.014 kb on - strand at 3731.099 kb on + strand at 3731.100 kb on - strand at 3731.100 kb on - strand at 3731.123 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 7.5 vol% remove 3,728,634 + -0.6 3,728,634 + -0.1 3,728,649 + +0.5 3,728,649 + +0.6 3,728,649 + -0.7 3,729,502 + -0.7 3,729,502 + -0.1 3,729,502 + -0.7 3,729,502 + -1.1 3,729,502 + -0.9 3,729,502 + -1.9 3,729,502 + -1.7 3,729,502 + +0.4 3,729,502 + -0.4 3,729,503 - +0.0 3,729,503 - +0.8 3,729,503 - +2.2 3,729,503 - -0.2 3,729,503 - +0.4 3,729,503 - +0.0 3,729,503 - -0.2 3,729,679 + +0.7 3,729,679 + +0.1 3,729,679 + -0.2 3,729,679 + -0.0 3,729,679 + +1.8 3,729,679 + +0.8 3,729,679 + -0.9 3,729,680 - -0.8 3,729,680 - -0.3 3,729,680 - +0.7 3,729,680 - +0.4 3,729,707 + AO353_16855 0.13 -1.0 3,729,708 - AO353_16855 0.13 -1.1 3,729,810 + AO353_16855 0.28 -2.2 3,729,810 + AO353_16855 0.28 +0.2 3,729,811 - AO353_16855 0.28 -1.2 3,729,917 + AO353_16855 0.43 +0.5 3,729,917 + AO353_16855 0.43 -0.5 3,729,918 - AO353_16855 0.43 -0.7 3,729,918 - AO353_16855 0.43 +0.2 3,729,942 + AO353_16855 0.47 -0.2 3,729,942 + AO353_16855 0.47 +0.2 3,730,071 + AO353_16855 0.65 -0.4 3,730,307 + -0.6 3,730,307 + -0.5 3,730,307 + -0.8 3,730,307 + +0.2 3,730,307 + -0.4 3,730,307 + -0.5 3,730,307 + -0.0 3,730,307 + -0.5 3,730,308 - -0.6 3,730,308 - -0.6 3,730,308 - +0.9 3,730,308 - -0.1 3,730,308 - -0.6 3,730,308 - -0.2 3,730,308 - +0.4 3,730,308 - -0.0 3,730,308 - +0.6 3,730,308 - +1.5 3,730,308 - +0.3 3,730,350 + +0.8 3,730,440 + +0.8 3,730,440 + +2.3 3,730,440 + +0.5 3,730,440 + +0.7 3,730,440 + +0.5 3,730,440 + +0.1 3,730,440 + +0.2 3,730,440 + -0.4 3,730,440 + +0.1 3,730,441 - -0.5 3,730,441 - -0.0 3,730,441 - +0.1 3,730,441 - -1.2 3,730,441 - +1.0 3,730,630 + AO353_16860 0.14 +0.1 3,730,630 + +0.4 3,730,631 - AO353_16860 0.15 +0.3 3,730,875 + AO353_16860 0.67 +0.5 3,730,875 + AO353_16860 0.67 -0.1 3,730,875 + AO353_16860 0.67 -0.8 3,730,876 - AO353_16860 0.67 +0.9 3,730,876 - AO353_16860 0.67 +0.8 3,730,912 + AO353_16860 0.75 -0.0 3,730,912 + AO353_16860 0.75 -0.3 3,730,912 + AO353_16860 0.75 +0.7 3,730,912 + AO353_16860 0.75 -1.4 3,730,912 + AO353_16860 0.75 +0.8 3,730,913 - AO353_16860 0.75 -0.7 3,730,913 - AO353_16860 0.75 +0.2 3,730,913 - AO353_16860 0.75 +1.4 3,730,913 - AO353_16860 0.75 +1.3 3,730,996 + +0.8 3,730,996 + -0.9 3,730,996 + +0.6 3,730,996 + -0.1 3,730,996 + -1.2 3,730,996 + -0.2 3,730,996 + -0.0 3,730,997 - +0.2 3,731,013 + +1.1 3,731,013 + +0.8 3,731,013 + +0.3 3,731,014 - +1.1 3,731,014 - +1.0 3,731,014 - +0.2 3,731,014 - +0.3 3,731,099 + -0.0 3,731,100 - -0.3 3,731,100 - -1.3 3,731,123 + +1.3
Or see this region's nucleotide sequence