Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13065 and AO353_13070 are separated by 134 nucleotides AO353_13070 and AO353_13075 are separated by 125 nucleotides AO353_13075 and AO353_13080 are separated by 9 nucleotides
AO353_13065: AO353_13065 - histidine kinase, at 2,894,679 to 2,896,220
_13065
AO353_13070: AO353_13070 - phosphoserine phosphatase, at 2,896,355 to 2,897,569
_13070
AO353_13075: AO353_13075 - phosphatidylserine decarboxylase, at 2,897,695 to 2,898,555
_13075
AO353_13080: AO353_13080 - thiosulfate sulfurtransferase, at 2,898,565 to 2,899,389
_13080
Position (kb)
2896
2897
2898 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2896.259 kb on - strand at 2896.319 kb on + strand at 2896.319 kb on + strand at 2896.319 kb on + strand at 2896.320 kb on - strand at 2896.320 kb on - strand at 2896.375 kb on - strand at 2896.375 kb on - strand at 2896.375 kb on - strand at 2896.375 kb on - strand at 2896.426 kb on - strand at 2896.563 kb on - strand, within AO353_13070 at 2896.563 kb on - strand, within AO353_13070 at 2896.611 kb on - strand at 2896.718 kb on + strand, within AO353_13070 at 2896.718 kb on + strand, within AO353_13070 at 2896.718 kb on + strand, within AO353_13070 at 2896.718 kb on + strand, within AO353_13070 at 2896.719 kb on - strand, within AO353_13070 at 2896.759 kb on + strand, within AO353_13070 at 2896.759 kb on + strand, within AO353_13070 at 2896.760 kb on - strand, within AO353_13070 at 2896.760 kb on - strand, within AO353_13070 at 2896.760 kb on - strand, within AO353_13070 at 2896.760 kb on - strand, within AO353_13070 at 2896.760 kb on - strand, within AO353_13070 at 2896.760 kb on - strand, within AO353_13070 at 2897.186 kb on + strand, within AO353_13070 at 2897.186 kb on + strand, within AO353_13070 at 2897.186 kb on + strand, within AO353_13070 at 2897.186 kb on + strand, within AO353_13070 at 2897.187 kb on - strand, within AO353_13070 at 2897.219 kb on + strand, within AO353_13070 at 2897.219 kb on + strand, within AO353_13070 at 2897.219 kb on + strand, within AO353_13070 at 2897.219 kb on + strand, within AO353_13070 at 2897.219 kb on + strand, within AO353_13070 at 2897.220 kb on - strand, within AO353_13070 at 2897.258 kb on + strand, within AO353_13070 at 2897.258 kb on + strand, within AO353_13070 at 2897.258 kb on + strand, within AO353_13070 at 2897.258 kb on + strand, within AO353_13070 at 2897.259 kb on - strand, within AO353_13070 at 2897.259 kb on - strand, within AO353_13070 at 2897.259 kb on - strand, within AO353_13070 at 2897.259 kb on - strand, within AO353_13070 at 2897.259 kb on - strand, within AO353_13070 at 2897.259 kb on - strand, within AO353_13070 at 2897.259 kb on - strand, within AO353_13070 at 2897.259 kb on - strand, within AO353_13070 at 2897.259 kb on - strand, within AO353_13070 at 2897.259 kb on - strand, within AO353_13070 at 2897.259 kb on - strand, within AO353_13070 at 2897.259 kb on - strand at 2897.259 kb on - strand, within AO353_13070 at 2897.259 kb on - strand at 2897.259 kb on - strand, within AO353_13070 at 2897.531 kb on + strand at 2897.531 kb on + strand at 2897.532 kb on - strand at 2897.532 kb on - strand at 2897.602 kb on + strand at 2897.602 kb on + strand at 2897.602 kb on + strand at 2897.602 kb on + strand at 2897.602 kb on + strand at 2897.602 kb on + strand at 2897.603 kb on - strand at 2897.603 kb on - strand at 2897.603 kb on - strand at 2897.603 kb on - strand at 2897.623 kb on + strand at 2897.624 kb on - strand at 2897.624 kb on - strand at 2898.567 kb on - strand at 2898.567 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 7.5 vol% remove 2,896,259 - -0.3 2,896,319 + +0.1 2,896,319 + -0.7 2,896,319 + +0.5 2,896,320 - +0.5 2,896,320 - +0.2 2,896,375 - -1.0 2,896,375 - -2.2 2,896,375 - -0.3 2,896,375 - +0.1 2,896,426 - -0.7 2,896,563 - AO353_13070 0.17 +3.1 2,896,563 - AO353_13070 0.17 -0.0 2,896,611 - -0.2 2,896,718 + AO353_13070 0.30 -0.8 2,896,718 + AO353_13070 0.30 -0.9 2,896,718 + AO353_13070 0.30 +0.3 2,896,718 + AO353_13070 0.30 -0.2 2,896,719 - AO353_13070 0.30 -1.3 2,896,759 + AO353_13070 0.33 -1.3 2,896,759 + AO353_13070 0.33 +1.1 2,896,760 - AO353_13070 0.33 +0.2 2,896,760 - AO353_13070 0.33 -1.3 2,896,760 - AO353_13070 0.33 -0.5 2,896,760 - AO353_13070 0.33 -0.2 2,896,760 - AO353_13070 0.33 -1.2 2,896,760 - AO353_13070 0.33 +0.1 2,897,186 + AO353_13070 0.68 -0.7 2,897,186 + AO353_13070 0.68 +0.2 2,897,186 + AO353_13070 0.68 +0.3 2,897,186 + AO353_13070 0.68 +0.7 2,897,187 - AO353_13070 0.68 +0.1 2,897,219 + AO353_13070 0.71 -0.8 2,897,219 + AO353_13070 0.71 +1.1 2,897,219 + AO353_13070 0.71 +0.5 2,897,219 + AO353_13070 0.71 -1.8 2,897,219 + AO353_13070 0.71 -1.0 2,897,220 - AO353_13070 0.71 -0.1 2,897,258 + AO353_13070 0.74 -1.2 2,897,258 + AO353_13070 0.74 -0.8 2,897,258 + AO353_13070 0.74 -0.6 2,897,258 + AO353_13070 0.74 -1.4 2,897,259 - AO353_13070 0.74 -0.2 2,897,259 - AO353_13070 0.74 -0.3 2,897,259 - AO353_13070 0.74 -0.8 2,897,259 - AO353_13070 0.74 -0.5 2,897,259 - AO353_13070 0.74 +0.9 2,897,259 - AO353_13070 0.74 +0.1 2,897,259 - AO353_13070 0.74 +0.5 2,897,259 - AO353_13070 0.74 -0.3 2,897,259 - AO353_13070 0.74 -1.1 2,897,259 - AO353_13070 0.74 -1.2 2,897,259 - AO353_13070 0.74 -1.3 2,897,259 - +1.1 2,897,259 - AO353_13070 0.74 -0.8 2,897,259 - +0.8 2,897,259 - AO353_13070 0.74 -1.3 2,897,531 + +0.8 2,897,531 + +0.3 2,897,532 - -0.5 2,897,532 - +0.0 2,897,602 + +0.7 2,897,602 + -0.3 2,897,602 + -0.7 2,897,602 + +1.4 2,897,602 + +0.5 2,897,602 + -1.6 2,897,603 - +1.1 2,897,603 - +0.4 2,897,603 - -0.1 2,897,603 - +0.1 2,897,623 + +1.5 2,897,624 - +0.3 2,897,624 - -0.7 2,898,567 - -1.9 2,898,567 - -0.7
Or see this region's nucleotide sequence