Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_11115 and AO353_11120 are separated by 146 nucleotides AO353_11120 and AO353_11125 are separated by 105 nucleotides AO353_11125 and AO353_11130 are separated by 373 nucleotides
AO353_11115: AO353_11115 - 23S ribosomal RNA, at 2,430,001 to 2,432,913
_11115
AO353_11120: AO353_11120 - 5S ribosomal RNA, at 2,433,060 to 2,433,175
_11120
AO353_11125: AO353_11125 - 5S ribosomal RNA, at 2,433,281 to 2,433,397
_11125
AO353_11130: AO353_11130 - chemotaxis protein, at 2,433,771 to 2,435,651
_11130
Position (kb)
2433
2434 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2433.225 kb on + strand at 2433.226 kb on - strand at 2433.226 kb on - strand at 2433.226 kb on - strand at 2433.226 kb on - strand at 2433.226 kb on - strand at 2433.226 kb on - strand at 2433.226 kb on - strand at 2433.251 kb on + strand at 2433.251 kb on + strand at 2433.251 kb on + strand at 2433.251 kb on + strand at 2433.251 kb on + strand at 2433.251 kb on + strand at 2433.251 kb on + strand at 2433.251 kb on + strand at 2433.251 kb on + strand at 2433.251 kb on + strand at 2433.251 kb on + strand at 2433.252 kb on - strand at 2433.252 kb on - strand at 2433.252 kb on - strand at 2433.252 kb on - strand at 2433.252 kb on - strand at 2433.252 kb on - strand at 2433.252 kb on - strand at 2433.252 kb on - strand at 2433.252 kb on - strand at 2433.252 kb on - strand at 2433.252 kb on - strand at 2433.252 kb on - strand at 2433.252 kb on - strand at 2433.252 kb on - strand at 2433.252 kb on - strand at 2433.261 kb on - strand at 2433.293 kb on - strand, within AO353_11125 at 2433.293 kb on - strand, within AO353_11125 at 2433.293 kb on - strand, within AO353_11125 at 2433.293 kb on - strand, within AO353_11125 at 2433.293 kb on - strand, within AO353_11125 at 2433.293 kb on - strand, within AO353_11125 at 2433.293 kb on - strand, within AO353_11125 at 2433.293 kb on - strand, within AO353_11125 at 2433.355 kb on + strand, within AO353_11125 at 2433.382 kb on + strand, within AO353_11125 at 2433.382 kb on + strand, within AO353_11125 at 2433.382 kb on + strand, within AO353_11125 at 2433.382 kb on + strand, within AO353_11125 at 2433.383 kb on - strand, within AO353_11125 at 2433.383 kb on - strand, within AO353_11125 at 2433.383 kb on - strand, within AO353_11125 at 2433.423 kb on + strand at 2433.561 kb on + strand at 2433.562 kb on - strand at 2433.575 kb on + strand at 2433.575 kb on + strand at 2433.575 kb on + strand at 2433.576 kb on - strand at 2433.587 kb on + strand at 2433.588 kb on - strand at 2433.588 kb on - strand at 2433.623 kb on + strand at 2433.623 kb on + strand at 2433.624 kb on - strand at 2433.631 kb on + strand at 2433.684 kb on + strand at 2433.685 kb on - strand at 2433.685 kb on - strand at 2433.685 kb on - strand at 2433.685 kb on - strand at 2433.685 kb on - strand at 2433.685 kb on - strand at 2433.695 kb on + strand at 2433.695 kb on + strand at 2433.695 kb on + strand at 2433.696 kb on - strand at 2433.696 kb on - strand at 2433.705 kb on + strand at 2433.705 kb on + strand at 2433.755 kb on + strand at 2433.755 kb on + strand at 2433.755 kb on + strand at 2433.756 kb on - strand at 2433.756 kb on - strand at 2433.756 kb on - strand at 2433.756 kb on - strand at 2433.791 kb on + strand at 2433.791 kb on + strand at 2433.792 kb on - strand at 2433.849 kb on + strand at 2433.849 kb on + strand at 2433.849 kb on + strand at 2433.850 kb on - strand at 2433.850 kb on - strand at 2433.850 kb on - strand at 2433.850 kb on - strand at 2433.850 kb on - strand at 2433.858 kb on + strand at 2433.872 kb on + strand at 2433.872 kb on + strand at 2433.873 kb on - strand at 2433.873 kb on - strand at 2433.873 kb on - strand at 2433.873 kb on - strand at 2434.065 kb on + strand, within AO353_11130 at 2434.065 kb on + strand, within AO353_11130 at 2434.065 kb on + strand, within AO353_11130 at 2434.065 kb on + strand, within AO353_11130 at 2434.065 kb on + strand, within AO353_11130 at 2434.065 kb on + strand, within AO353_11130 at 2434.066 kb on - strand, within AO353_11130 at 2434.066 kb on - strand, within AO353_11130 at 2434.066 kb on - strand, within AO353_11130 at 2434.066 kb on - strand, within AO353_11130 at 2434.066 kb on - strand, within AO353_11130 at 2434.066 kb on - strand, within AO353_11130 at 2434.066 kb on - strand, within AO353_11130 at 2434.066 kb on - strand, within AO353_11130 at 2434.091 kb on + strand, within AO353_11130 at 2434.092 kb on - strand, within AO353_11130 at 2434.125 kb on + strand, within AO353_11130 at 2434.126 kb on - strand, within AO353_11130 at 2434.149 kb on + strand, within AO353_11130 at 2434.149 kb on + strand, within AO353_11130 at 2434.150 kb on - strand, within AO353_11130 at 2434.150 kb on - strand, within AO353_11130 at 2434.150 kb on - strand, within AO353_11130 at 2434.150 kb on - strand, within AO353_11130 at 2434.163 kb on - strand, within AO353_11130 at 2434.163 kb on - strand, within AO353_11130 at 2434.194 kb on + strand, within AO353_11130 at 2434.194 kb on + strand, within AO353_11130 at 2434.194 kb on + strand, within AO353_11130 at 2434.194 kb on + strand, within AO353_11130 at 2434.194 kb on + strand, within AO353_11130 at 2434.194 kb on + strand, within AO353_11130 at 2434.194 kb on + strand, within AO353_11130 at 2434.195 kb on - strand, within AO353_11130 at 2434.195 kb on - strand, within AO353_11130 at 2434.195 kb on - strand, within AO353_11130
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 7.5 vol% remove 2,433,225 + -0.8 2,433,226 - -1.1 2,433,226 - -0.3 2,433,226 - -2.3 2,433,226 - +0.0 2,433,226 - -0.8 2,433,226 - +1.2 2,433,226 - -0.9 2,433,251 + -1.6 2,433,251 + +0.2 2,433,251 + +0.4 2,433,251 + -0.8 2,433,251 + -0.3 2,433,251 + -1.5 2,433,251 + +1.1 2,433,251 + +0.2 2,433,251 + -0.3 2,433,251 + +1.1 2,433,251 + +0.2 2,433,252 - -0.6 2,433,252 - +0.7 2,433,252 - -0.3 2,433,252 - -1.1 2,433,252 - +0.1 2,433,252 - +1.3 2,433,252 - -2.3 2,433,252 - -1.1 2,433,252 - -0.6 2,433,252 - +1.5 2,433,252 - -0.1 2,433,252 - -0.1 2,433,252 - -0.5 2,433,252 - +0.3 2,433,252 - +1.3 2,433,261 - +1.7 2,433,293 - AO353_11125 0.10 -1.1 2,433,293 - AO353_11125 0.10 -0.7 2,433,293 - AO353_11125 0.10 -1.8 2,433,293 - AO353_11125 0.10 -0.3 2,433,293 - AO353_11125 0.10 +0.0 2,433,293 - AO353_11125 0.10 -1.4 2,433,293 - AO353_11125 0.10 +0.2 2,433,293 - AO353_11125 0.10 -0.1 2,433,355 + AO353_11125 0.63 -0.8 2,433,382 + AO353_11125 0.86 -0.2 2,433,382 + AO353_11125 0.86 -0.1 2,433,382 + AO353_11125 0.86 +0.2 2,433,382 + AO353_11125 0.86 -1.1 2,433,383 - AO353_11125 0.87 -0.7 2,433,383 - AO353_11125 0.87 +1.9 2,433,383 - AO353_11125 0.87 +0.7 2,433,423 + -0.4 2,433,561 + -0.6 2,433,562 - +0.8 2,433,575 + -0.1 2,433,575 + +0.2 2,433,575 + -0.2 2,433,576 - +0.0 2,433,587 + -0.3 2,433,588 - +0.1 2,433,588 - -0.1 2,433,623 + +0.2 2,433,623 + +1.8 2,433,624 - +0.5 2,433,631 + +0.1 2,433,684 + -0.3 2,433,685 - -1.1 2,433,685 - +0.2 2,433,685 - +0.6 2,433,685 - -0.2 2,433,685 - -2.0 2,433,685 - -2.1 2,433,695 + -0.5 2,433,695 + +0.1 2,433,695 + -0.9 2,433,696 - +1.7 2,433,696 - -1.0 2,433,705 + +0.4 2,433,705 + +0.2 2,433,755 + -0.8 2,433,755 + -1.8 2,433,755 + +2.0 2,433,756 - +0.6 2,433,756 - -0.5 2,433,756 - -1.0 2,433,756 - -0.7 2,433,791 + -0.3 2,433,791 + -0.6 2,433,792 - -0.2 2,433,849 + +2.0 2,433,849 + -0.3 2,433,849 + +0.3 2,433,850 - -0.7 2,433,850 - -0.3 2,433,850 - +0.4 2,433,850 - +0.0 2,433,850 - -0.1 2,433,858 + -0.8 2,433,872 + -0.8 2,433,872 + -0.2 2,433,873 - -0.4 2,433,873 - +0.9 2,433,873 - +0.3 2,433,873 - -0.3 2,434,065 + AO353_11130 0.16 -0.4 2,434,065 + AO353_11130 0.16 -0.5 2,434,065 + AO353_11130 0.16 -0.2 2,434,065 + AO353_11130 0.16 -0.3 2,434,065 + AO353_11130 0.16 -1.5 2,434,065 + AO353_11130 0.16 -0.1 2,434,066 - AO353_11130 0.16 +0.6 2,434,066 - AO353_11130 0.16 -2.1 2,434,066 - AO353_11130 0.16 -1.6 2,434,066 - AO353_11130 0.16 -0.5 2,434,066 - AO353_11130 0.16 +0.2 2,434,066 - AO353_11130 0.16 -1.5 2,434,066 - AO353_11130 0.16 -0.7 2,434,066 - AO353_11130 0.16 -0.5 2,434,091 + AO353_11130 0.17 +0.2 2,434,092 - AO353_11130 0.17 -1.5 2,434,125 + AO353_11130 0.19 -1.8 2,434,126 - AO353_11130 0.19 +0.7 2,434,149 + AO353_11130 0.20 -0.3 2,434,149 + AO353_11130 0.20 -0.1 2,434,150 - AO353_11130 0.20 +0.3 2,434,150 - AO353_11130 0.20 +0.1 2,434,150 - AO353_11130 0.20 +0.5 2,434,150 - AO353_11130 0.20 +0.3 2,434,163 - AO353_11130 0.21 -1.2 2,434,163 - AO353_11130 0.21 +1.3 2,434,194 + AO353_11130 0.22 -0.4 2,434,194 + AO353_11130 0.22 +0.4 2,434,194 + AO353_11130 0.22 -0.7 2,434,194 + AO353_11130 0.22 +0.2 2,434,194 + AO353_11130 0.22 +2.0 2,434,194 + AO353_11130 0.22 -0.2 2,434,194 + AO353_11130 0.22 -0.5 2,434,195 - AO353_11130 0.23 -1.4 2,434,195 - AO353_11130 0.23 -0.7 2,434,195 - AO353_11130 0.23 -0.1
Or see this region's nucleotide sequence