Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_09310 and AO353_09315 are separated by 277 nucleotides AO353_09315 and AO353_09320 are separated by 9 nucleotides
AO353_09310: AO353_09310 - energy transducer TonB, at 2,040,284 to 2,041,033
_09310
AO353_09315: AO353_09315 - LysR family transcriptional regulator, at 2,041,311 to 2,042,234
_09315
AO353_09320: AO353_09320 - ATP-dependent DNA helicase RecG, at 2,042,244 to 2,044,319
_09320
Position (kb)
2041
2042
2043 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2041.031 kb on + strand at 2041.031 kb on + strand at 2041.031 kb on + strand at 2041.031 kb on + strand at 2041.031 kb on + strand at 2041.031 kb on + strand at 2041.031 kb on + strand at 2041.031 kb on + strand at 2041.032 kb on - strand at 2041.032 kb on - strand at 2041.032 kb on - strand at 2041.032 kb on - strand at 2041.054 kb on + strand at 2041.054 kb on + strand at 2041.054 kb on + strand at 2041.055 kb on - strand at 2041.055 kb on - strand at 2041.055 kb on - strand at 2041.055 kb on - strand at 2041.055 kb on - strand at 2041.055 kb on - strand at 2041.055 kb on - strand at 2041.055 kb on - strand at 2041.055 kb on - strand at 2041.140 kb on + strand at 2041.140 kb on + strand at 2041.140 kb on + strand at 2041.140 kb on + strand at 2041.140 kb on + strand at 2041.141 kb on - strand at 2041.141 kb on - strand at 2041.141 kb on - strand at 2041.252 kb on + strand at 2041.279 kb on + strand at 2041.280 kb on - strand at 2041.311 kb on - strand at 2041.327 kb on + strand at 2041.327 kb on + strand at 2041.327 kb on + strand at 2041.327 kb on + strand at 2041.327 kb on + strand at 2041.327 kb on + strand at 2041.328 kb on - strand at 2041.328 kb on - strand at 2041.328 kb on - strand at 2041.328 kb on - strand at 2041.328 kb on - strand at 2041.328 kb on - strand at 2041.328 kb on - strand at 2041.328 kb on - strand at 2041.332 kb on + strand at 2041.332 kb on + strand at 2041.332 kb on + strand at 2041.332 kb on + strand at 2041.332 kb on + strand at 2041.332 kb on + strand at 2041.332 kb on + strand at 2041.332 kb on + strand at 2041.332 kb on + strand at 2041.332 kb on + strand at 2041.332 kb on + strand at 2041.332 kb on + strand at 2041.333 kb on - strand at 2041.333 kb on - strand at 2041.333 kb on - strand at 2041.333 kb on - strand at 2041.333 kb on - strand at 2041.333 kb on - strand at 2041.541 kb on + strand, within AO353_09315 at 2041.541 kb on + strand, within AO353_09315 at 2041.541 kb on + strand, within AO353_09315 at 2041.541 kb on + strand, within AO353_09315 at 2041.541 kb on + strand, within AO353_09315 at 2041.541 kb on + strand, within AO353_09315 at 2041.542 kb on - strand, within AO353_09315 at 2041.605 kb on + strand, within AO353_09315 at 2041.605 kb on + strand, within AO353_09315 at 2041.605 kb on + strand, within AO353_09315 at 2041.605 kb on + strand, within AO353_09315 at 2041.606 kb on - strand, within AO353_09315 at 2041.606 kb on - strand, within AO353_09315 at 2041.606 kb on - strand, within AO353_09315 at 2041.606 kb on - strand, within AO353_09315 at 2041.606 kb on - strand, within AO353_09315 at 2041.606 kb on - strand, within AO353_09315 at 2041.677 kb on + strand, within AO353_09315 at 2041.677 kb on + strand, within AO353_09315 at 2041.677 kb on + strand, within AO353_09315 at 2041.677 kb on + strand, within AO353_09315 at 2041.677 kb on + strand, within AO353_09315 at 2041.678 kb on - strand, within AO353_09315 at 2041.678 kb on - strand, within AO353_09315 at 2041.678 kb on - strand, within AO353_09315 at 2041.678 kb on - strand, within AO353_09315 at 2041.678 kb on - strand, within AO353_09315 at 2041.678 kb on - strand, within AO353_09315 at 2041.678 kb on - strand, within AO353_09315 at 2041.791 kb on + strand, within AO353_09315 at 2041.792 kb on - strand, within AO353_09315 at 2041.792 kb on - strand, within AO353_09315 at 2041.806 kb on + strand, within AO353_09315 at 2041.806 kb on + strand, within AO353_09315 at 2041.806 kb on + strand, within AO353_09315 at 2041.806 kb on + strand, within AO353_09315 at 2041.806 kb on + strand, within AO353_09315 at 2041.806 kb on + strand, within AO353_09315 at 2041.806 kb on + strand, within AO353_09315 at 2041.807 kb on - strand, within AO353_09315 at 2041.807 kb on - strand, within AO353_09315 at 2041.807 kb on - strand, within AO353_09315 at 2041.807 kb on - strand, within AO353_09315 at 2041.807 kb on - strand, within AO353_09315 at 2041.807 kb on - strand, within AO353_09315 at 2041.807 kb on - strand, within AO353_09315 at 2041.807 kb on - strand, within AO353_09315 at 2041.807 kb on - strand, within AO353_09315 at 2041.807 kb on - strand, within AO353_09315 at 2041.807 kb on - strand, within AO353_09315 at 2041.807 kb on - strand, within AO353_09315 at 2042.070 kb on + strand, within AO353_09315 at 2042.070 kb on + strand, within AO353_09315 at 2042.070 kb on + strand, within AO353_09315 at 2042.071 kb on - strand, within AO353_09315 at 2042.071 kb on - strand, within AO353_09315 at 2042.239 kb on + strand at 2042.239 kb on + strand at 2042.240 kb on - strand at 2042.240 kb on - strand at 2042.455 kb on + strand, within AO353_09320 at 2042.455 kb on + strand, within AO353_09320 at 2042.455 kb on + strand, within AO353_09320 at 2042.455 kb on + strand, within AO353_09320 at 2042.455 kb on + strand, within AO353_09320 at 2042.455 kb on + strand, within AO353_09320 at 2042.455 kb on + strand, within AO353_09320 at 2042.456 kb on - strand, within AO353_09320 at 2042.456 kb on - strand, within AO353_09320 at 2042.456 kb on - strand, within AO353_09320 at 2042.456 kb on - strand, within AO353_09320 at 2042.456 kb on - strand, within AO353_09320 at 2042.526 kb on + strand, within AO353_09320 at 2042.526 kb on + strand, within AO353_09320 at 2042.526 kb on + strand, within AO353_09320 at 2042.526 kb on + strand, within AO353_09320 at 2042.526 kb on + strand, within AO353_09320 at 2042.527 kb on - strand, within AO353_09320 at 2042.527 kb on - strand, within AO353_09320 at 2042.527 kb on - strand, within AO353_09320 at 2042.527 kb on - strand, within AO353_09320 at 2042.527 kb on - strand, within AO353_09320 at 2042.527 kb on - strand, within AO353_09320 at 2042.584 kb on - strand, within AO353_09320 at 2042.622 kb on + strand, within AO353_09320 at 2042.622 kb on + strand, within AO353_09320 at 2042.623 kb on - strand, within AO353_09320 at 2042.634 kb on + strand, within AO353_09320 at 2042.635 kb on - strand, within AO353_09320 at 2042.691 kb on + strand, within AO353_09320 at 2042.808 kb on + strand, within AO353_09320 at 2042.841 kb on + strand, within AO353_09320 at 2043.024 kb on + strand, within AO353_09320 at 2043.087 kb on + strand, within AO353_09320 at 2043.087 kb on + strand, within AO353_09320
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 7.5 vol% remove 2,041,031 + +0.7 2,041,031 + -0.2 2,041,031 + +0.6 2,041,031 + -1.4 2,041,031 + +0.0 2,041,031 + -0.5 2,041,031 + -0.4 2,041,031 + +0.4 2,041,032 - +0.7 2,041,032 - +0.5 2,041,032 - -0.7 2,041,032 - -0.5 2,041,054 + -1.0 2,041,054 + -1.3 2,041,054 + +0.1 2,041,055 - +0.7 2,041,055 - +0.0 2,041,055 - +0.7 2,041,055 - -0.1 2,041,055 - -0.9 2,041,055 - -0.2 2,041,055 - -1.3 2,041,055 - +1.5 2,041,055 - -1.6 2,041,140 + +1.6 2,041,140 + -0.6 2,041,140 + +0.5 2,041,140 + +0.5 2,041,140 + -0.1 2,041,141 - +0.7 2,041,141 - +0.2 2,041,141 - +1.0 2,041,252 + +0.3 2,041,279 + +0.3 2,041,280 - -2.1 2,041,311 - -0.5 2,041,327 + +0.8 2,041,327 + -0.8 2,041,327 + -1.9 2,041,327 + +0.3 2,041,327 + +0.1 2,041,327 + -0.2 2,041,328 - -0.4 2,041,328 - -0.2 2,041,328 - -0.7 2,041,328 - -0.7 2,041,328 - +0.3 2,041,328 - -2.0 2,041,328 - +0.6 2,041,328 - +0.1 2,041,332 + +0.5 2,041,332 + -0.8 2,041,332 + -1.8 2,041,332 + -1.1 2,041,332 + -1.7 2,041,332 + -1.8 2,041,332 + +0.0 2,041,332 + -0.5 2,041,332 + -0.1 2,041,332 + -1.1 2,041,332 + +0.9 2,041,332 + +0.4 2,041,333 - -1.3 2,041,333 - +0.3 2,041,333 - +1.1 2,041,333 - -1.7 2,041,333 - -0.6 2,041,333 - -1.1 2,041,541 + AO353_09315 0.25 +0.9 2,041,541 + AO353_09315 0.25 +0.3 2,041,541 + AO353_09315 0.25 +0.3 2,041,541 + AO353_09315 0.25 -1.2 2,041,541 + AO353_09315 0.25 -0.1 2,041,541 + AO353_09315 0.25 -0.5 2,041,542 - AO353_09315 0.25 +1.3 2,041,605 + AO353_09315 0.32 -0.3 2,041,605 + AO353_09315 0.32 +0.2 2,041,605 + AO353_09315 0.32 +0.5 2,041,605 + AO353_09315 0.32 +1.3 2,041,606 - AO353_09315 0.32 -0.2 2,041,606 - AO353_09315 0.32 -3.0 2,041,606 - AO353_09315 0.32 -1.4 2,041,606 - AO353_09315 0.32 +0.2 2,041,606 - AO353_09315 0.32 -1.3 2,041,606 - AO353_09315 0.32 -1.5 2,041,677 + AO353_09315 0.40 +0.2 2,041,677 + AO353_09315 0.40 -1.5 2,041,677 + AO353_09315 0.40 -0.2 2,041,677 + AO353_09315 0.40 -1.5 2,041,677 + AO353_09315 0.40 -0.3 2,041,678 - AO353_09315 0.40 -0.3 2,041,678 - AO353_09315 0.40 -0.3 2,041,678 - AO353_09315 0.40 -1.5 2,041,678 - AO353_09315 0.40 -1.3 2,041,678 - AO353_09315 0.40 -2.4 2,041,678 - AO353_09315 0.40 -0.3 2,041,678 - AO353_09315 0.40 -0.1 2,041,791 + AO353_09315 0.52 -0.7 2,041,792 - AO353_09315 0.52 +0.3 2,041,792 - AO353_09315 0.52 +0.7 2,041,806 + AO353_09315 0.54 -1.2 2,041,806 + AO353_09315 0.54 -0.8 2,041,806 + AO353_09315 0.54 -0.8 2,041,806 + AO353_09315 0.54 -0.6 2,041,806 + AO353_09315 0.54 -1.7 2,041,806 + AO353_09315 0.54 -0.1 2,041,806 + AO353_09315 0.54 +0.3 2,041,807 - AO353_09315 0.54 -1.0 2,041,807 - AO353_09315 0.54 +0.7 2,041,807 - AO353_09315 0.54 +0.0 2,041,807 - AO353_09315 0.54 -1.8 2,041,807 - AO353_09315 0.54 -2.5 2,041,807 - AO353_09315 0.54 -0.2 2,041,807 - AO353_09315 0.54 -1.7 2,041,807 - AO353_09315 0.54 -0.7 2,041,807 - AO353_09315 0.54 -0.2 2,041,807 - AO353_09315 0.54 -0.9 2,041,807 - AO353_09315 0.54 -1.7 2,041,807 - AO353_09315 0.54 -0.3 2,042,070 + AO353_09315 0.82 +0.5 2,042,070 + AO353_09315 0.82 -1.6 2,042,070 + AO353_09315 0.82 -2.4 2,042,071 - AO353_09315 0.82 -1.3 2,042,071 - AO353_09315 0.82 +0.0 2,042,239 + +0.3 2,042,239 + -0.6 2,042,240 - -0.8 2,042,240 - -0.8 2,042,455 + AO353_09320 0.10 +0.2 2,042,455 + AO353_09320 0.10 -1.3 2,042,455 + AO353_09320 0.10 -0.5 2,042,455 + AO353_09320 0.10 -1.9 2,042,455 + AO353_09320 0.10 +0.6 2,042,455 + AO353_09320 0.10 -1.0 2,042,455 + AO353_09320 0.10 -1.1 2,042,456 - AO353_09320 0.10 -1.1 2,042,456 - AO353_09320 0.10 +0.3 2,042,456 - AO353_09320 0.10 -0.5 2,042,456 - AO353_09320 0.10 -0.3 2,042,456 - AO353_09320 0.10 -1.9 2,042,526 + AO353_09320 0.14 -0.3 2,042,526 + AO353_09320 0.14 +1.0 2,042,526 + AO353_09320 0.14 -0.6 2,042,526 + AO353_09320 0.14 -0.8 2,042,526 + AO353_09320 0.14 -2.4 2,042,527 - AO353_09320 0.14 +0.5 2,042,527 - AO353_09320 0.14 -2.1 2,042,527 - AO353_09320 0.14 -0.5 2,042,527 - AO353_09320 0.14 -0.4 2,042,527 - AO353_09320 0.14 -0.8 2,042,527 - AO353_09320 0.14 +0.3 2,042,584 - AO353_09320 0.16 -0.4 2,042,622 + AO353_09320 0.18 -0.5 2,042,622 + AO353_09320 0.18 -0.3 2,042,623 - AO353_09320 0.18 +0.2 2,042,634 + AO353_09320 0.19 -1.6 2,042,635 - AO353_09320 0.19 +0.7 2,042,691 + AO353_09320 0.22 -0.8 2,042,808 + AO353_09320 0.27 +1.0 2,042,841 + AO353_09320 0.29 +0.7 2,043,024 + AO353_09320 0.38 -0.3 2,043,087 + AO353_09320 0.41 -1.1 2,043,087 + AO353_09320 0.41 +2.1
Or see this region's nucleotide sequence