Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00455 and AO353_00460 are separated by 197 nucleotides AO353_00460 and AO353_00465 are separated by 252 nucleotides AO353_00465 and AO353_00470 are separated by 10 nucleotides
AO353_00455: AO353_00455 - beta-hexosaminidase, at 92,743 to 93,753
_00455
AO353_00460: AO353_00460 - TetR family transcriptional regulator, at 93,951 to 94,658
_00460
AO353_00465: AO353_00465 - LexA family transcriptional regulator, at 94,911 to 95,519
_00465
AO353_00470: AO353_00470 - CDP-glycerol--UDP-pyrophosphoryl-N- acetylglucosaminyl-N-acetylmannosamine glycerophosphotransferase, at 95,530 to 96,003
_00470
Position (kb)
93
94
95 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 93.037 kb on + strand, within AO353_00455 at 93.038 kb on - strand, within AO353_00455 at 93.107 kb on + strand, within AO353_00455 at 93.467 kb on + strand, within AO353_00455 at 93.468 kb on - strand, within AO353_00455 at 93.840 kb on - strand at 93.843 kb on - strand at 93.864 kb on - strand at 93.910 kb on + strand at 93.924 kb on + strand at 93.924 kb on + strand at 93.924 kb on + strand at 93.925 kb on - strand at 93.925 kb on - strand at 93.925 kb on - strand at 93.925 kb on - strand at 93.925 kb on - strand at 93.925 kb on - strand at 93.952 kb on + strand at 93.953 kb on - strand at 93.953 kb on - strand at 93.953 kb on - strand at 93.953 kb on - strand at 94.209 kb on - strand, within AO353_00460 at 94.241 kb on - strand, within AO353_00460 at 94.241 kb on - strand, within AO353_00460 at 94.252 kb on - strand, within AO353_00460 at 94.262 kb on - strand, within AO353_00460 at 94.262 kb on - strand, within AO353_00460 at 94.262 kb on - strand, within AO353_00460 at 94.262 kb on - strand, within AO353_00460 at 94.335 kb on - strand, within AO353_00460 at 94.693 kb on + strand at 94.693 kb on + strand at 94.693 kb on + strand at 94.694 kb on - strand at 94.694 kb on - strand at 94.694 kb on - strand at 94.694 kb on - strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.756 kb on + strand at 94.756 kb on + strand at 94.757 kb on - strand at 94.757 kb on - strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.763 kb on - strand at 94.788 kb on + strand at 94.788 kb on + strand at 94.788 kb on + strand at 94.788 kb on + strand at 94.788 kb on + strand at 94.789 kb on - strand at 94.789 kb on - strand at 94.789 kb on - strand at 94.812 kb on + strand at 94.813 kb on - strand at 94.813 kb on - strand at 94.813 kb on - strand at 94.836 kb on + strand at 94.836 kb on + strand at 94.836 kb on + strand at 94.870 kb on - strand at 94.871 kb on + strand at 94.871 kb on + strand at 94.873 kb on + strand at 94.873 kb on + strand at 95.518 kb on - strand at 95.530 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 7.5 vol% remove 93,037 + AO353_00455 0.29 -1.9 93,038 - AO353_00455 0.29 -1.2 93,107 + AO353_00455 0.36 -0.2 93,467 + AO353_00455 0.72 -1.6 93,468 - AO353_00455 0.72 -1.8 93,840 - -1.0 93,843 - -0.5 93,864 - -0.8 93,910 + +0.2 93,924 + -1.1 93,924 + -0.0 93,924 + +0.3 93,925 - -1.2 93,925 - +1.0 93,925 - +1.1 93,925 - +0.3 93,925 - -0.5 93,925 - +0.5 93,952 + +0.1 93,953 - -0.6 93,953 - +0.1 93,953 - -0.1 93,953 - +0.4 94,209 - AO353_00460 0.36 +1.5 94,241 - AO353_00460 0.41 +0.5 94,241 - AO353_00460 0.41 -0.5 94,252 - AO353_00460 0.43 -1.2 94,262 - AO353_00460 0.44 +0.5 94,262 - AO353_00460 0.44 -1.5 94,262 - AO353_00460 0.44 +0.8 94,262 - AO353_00460 0.44 -0.6 94,335 - AO353_00460 0.54 -1.8 94,693 + +1.0 94,693 + +2.5 94,693 + -1.4 94,694 - -1.0 94,694 - -0.8 94,694 - -2.0 94,694 - +0.5 94,752 + -1.3 94,752 + +0.2 94,752 + -0.3 94,752 + -0.5 94,752 + -0.6 94,752 + +0.2 94,752 + -1.0 94,752 + +1.5 94,752 + -0.6 94,752 + -0.5 94,753 - -1.3 94,753 - -0.8 94,753 - -0.9 94,753 - -1.6 94,753 - -0.0 94,753 - -1.0 94,753 - +2.8 94,756 + +0.2 94,756 + +0.8 94,757 - +0.4 94,757 - +1.5 94,762 + -1.0 94,762 + +0.5 94,762 + -1.0 94,762 + +0.3 94,762 + +1.5 94,762 + -0.8 94,762 + -0.4 94,763 - +0.3 94,788 + +0.5 94,788 + -0.0 94,788 + +0.1 94,788 + -1.4 94,788 + -1.6 94,789 - -0.5 94,789 - +1.9 94,789 - -0.1 94,812 + +1.5 94,813 - -1.3 94,813 - -0.8 94,813 - +0.3 94,836 + -0.0 94,836 + -1.4 94,836 + -0.6 94,870 - -1.5 94,871 + -0.9 94,871 + -0.2 94,873 + +0.8 94,873 + -0.5 95,518 - -1.5 95,530 - -0.5
Or see this region's nucleotide sequence