Experiment: Ceftazidime 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21270 and ABZR86_RS21275 are separated by 60 nucleotides ABZR86_RS21275 and ABZR86_RS21280 are separated by 11 nucleotides ABZR86_RS21280 and ABZR86_RS21285 are separated by 30 nucleotides ABZR86_RS21285 and ABZR86_RS21290 are separated by 16 nucleotides
ABZR86_RS21270: ABZR86_RS21270 - transglutaminase-like domain-containing protein, at 222,332 to 223,864
_RS21270
ABZR86_RS21275: ABZR86_RS21275 - SPFH domain-containing protein, at 223,925 to 224,797
_RS21275
ABZR86_RS21280: ABZR86_RS21280 - hypothetical protein, at 224,809 to 225,006
_RS21280
ABZR86_RS21285: ABZR86_RS21285 - hypothetical protein, at 225,037 to 225,417
_RS21285
ABZR86_RS21290: ABZR86_RS21290 - CPBP family glutamic-type intramembrane protease, at 225,434 to 226,201
_RS21290
Position (kb) 224
225
226 Strain fitness (log2 ratio) -1
0
1 at 223.917 kb on + strand at 223.917 kb on + strand at 223.917 kb on + strand at 223.917 kb on + strand at 224.150 kb on + strand, within ABZR86_RS21275 at 224.150 kb on + strand, within ABZR86_RS21275 at 224.150 kb on + strand, within ABZR86_RS21275 at 224.151 kb on - strand, within ABZR86_RS21275 at 224.198 kb on + strand, within ABZR86_RS21275 at 224.199 kb on - strand, within ABZR86_RS21275 at 224.331 kb on + strand, within ABZR86_RS21275 at 224.332 kb on - strand, within ABZR86_RS21275 at 224.332 kb on - strand, within ABZR86_RS21275 at 224.405 kb on + strand, within ABZR86_RS21275 at 224.405 kb on + strand, within ABZR86_RS21275 at 224.406 kb on - strand, within ABZR86_RS21275 at 224.406 kb on - strand, within ABZR86_RS21275 at 224.411 kb on + strand, within ABZR86_RS21275 at 224.412 kb on - strand, within ABZR86_RS21275 at 224.917 kb on + strand, within ABZR86_RS21280 at 224.918 kb on - strand, within ABZR86_RS21280 at 224.918 kb on - strand, within ABZR86_RS21280 at 224.921 kb on + strand, within ABZR86_RS21280 at 224.922 kb on - strand, within ABZR86_RS21280 at 225.005 kb on - strand at 225.005 kb on - strand at 225.163 kb on + strand, within ABZR86_RS21285 at 225.163 kb on + strand, within ABZR86_RS21285 at 225.335 kb on - strand, within ABZR86_RS21285 at 225.527 kb on + strand, within ABZR86_RS21290 at 225.660 kb on - strand, within ABZR86_RS21290 at 225.695 kb on + strand, within ABZR86_RS21290 at 225.771 kb on + strand, within ABZR86_RS21290 at 225.857 kb on + strand, within ABZR86_RS21290 at 225.857 kb on + strand, within ABZR86_RS21290 at 225.857 kb on + strand, within ABZR86_RS21290 at 225.858 kb on - strand, within ABZR86_RS21290 at 225.858 kb on - strand, within ABZR86_RS21290 at 225.956 kb on + strand, within ABZR86_RS21290 at 225.956 kb on + strand, within ABZR86_RS21290 at 225.956 kb on + strand, within ABZR86_RS21290 at 225.956 kb on + strand, within ABZR86_RS21290
Per-strain Table
Position Strand Gene LocusTag Fraction Ceftazidime 0.1 mg/ml remove 223,917 + -0.1 223,917 + -0.2 223,917 + +0.1 223,917 + +0.1 224,150 + ABZR86_RS21275 0.26 -0.3 224,150 + ABZR86_RS21275 0.26 -0.1 224,150 + ABZR86_RS21275 0.26 -0.1 224,151 - ABZR86_RS21275 0.26 -0.9 224,198 + ABZR86_RS21275 0.31 -0.4 224,199 - ABZR86_RS21275 0.31 -0.2 224,331 + ABZR86_RS21275 0.47 +0.5 224,332 - ABZR86_RS21275 0.47 -0.3 224,332 - ABZR86_RS21275 0.47 -0.1 224,405 + ABZR86_RS21275 0.55 -0.6 224,405 + ABZR86_RS21275 0.55 -0.2 224,406 - ABZR86_RS21275 0.55 -0.3 224,406 - ABZR86_RS21275 0.55 +0.2 224,411 + ABZR86_RS21275 0.56 -0.5 224,412 - ABZR86_RS21275 0.56 +0.3 224,917 + ABZR86_RS21280 0.55 -0.3 224,918 - ABZR86_RS21280 0.55 -0.6 224,918 - ABZR86_RS21280 0.55 +0.5 224,921 + ABZR86_RS21280 0.57 -0.5 224,922 - ABZR86_RS21280 0.57 +0.6 225,005 - +0.3 225,005 - -0.3 225,163 + ABZR86_RS21285 0.33 +0.4 225,163 + ABZR86_RS21285 0.33 +0.3 225,335 - ABZR86_RS21285 0.78 -0.8 225,527 + ABZR86_RS21290 0.12 +0.3 225,660 - ABZR86_RS21290 0.29 -0.1 225,695 + ABZR86_RS21290 0.34 -0.3 225,771 + ABZR86_RS21290 0.44 -0.1 225,857 + ABZR86_RS21290 0.55 +0.2 225,857 + ABZR86_RS21290 0.55 -0.1 225,857 + ABZR86_RS21290 0.55 -0.2 225,858 - ABZR86_RS21290 0.55 +0.5 225,858 - ABZR86_RS21290 0.55 +0.3 225,956 + ABZR86_RS21290 0.68 +0.8 225,956 + ABZR86_RS21290 0.68 -0.3 225,956 + ABZR86_RS21290 0.68 -0.1 225,956 + ABZR86_RS21290 0.68 +0.4
Or see this region's nucleotide sequence