Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS17625

Experiment: Ceftazidime 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.1 mg/ml
3,977,014	-				-0.2
3,977,084	-				+0.8
3,977,099	+		ABZR86_RS17615	0.14	+0.0
3,977,297	+		ABZR86_RS17615	0.67	+0.6
3,977,297	+		ABZR86_RS17615	0.67	+0.3
3,977,298	-		ABZR86_RS17615	0.67	+0.0
3,977,298	-		ABZR86_RS17615	0.67	+0.1
3,977,491	-				+0.5
3,977,743	-		ABZR86_RS17620	0.52	-0.2
3,977,743	-		ABZR86_RS17620	0.52	+0.0
3,977,743	-		ABZR86_RS17620	0.52	+0.3
3,978,116	+				+0.1
3,978,117	-				+0.7
3,978,117	-				-0.5
3,978,117	-				+0.8
3,978,117	-				+0.5
3,978,142	-				+0.7
3,978,143	+				+0.6
3,978,144	-				-0.6
3,978,241	-				+0.7
3,978,370	+		ABZR86_RS17625	0.11	+0.3
3,978,418	-		ABZR86_RS17625	0.13	+0.7
3,978,433	-		ABZR86_RS17625	0.13	-0.4
3,978,449	+		ABZR86_RS17625	0.14	+0.9
3,978,453	+		ABZR86_RS17625	0.14	-0.1
3,978,453	+		ABZR86_RS17625	0.14	+0.6
3,978,453	+		ABZR86_RS17625	0.14	+0.3
3,978,453	+		ABZR86_RS17625	0.14	+0.3
3,978,453	+		ABZR86_RS17625	0.14	+0.7
3,978,453	+		ABZR86_RS17625	0.14	-0.1
3,978,454	-		ABZR86_RS17625	0.14	+1.1
3,978,454	-		ABZR86_RS17625	0.14	-0.4
3,978,454	-		ABZR86_RS17625	0.14	+0.1
3,978,454	-		ABZR86_RS17625	0.14	+1.1
3,978,455	+		ABZR86_RS17625	0.14	+0.5
3,978,455	+		ABZR86_RS17625	0.14	-0.3
3,978,455	+		ABZR86_RS17625	0.14	+0.5
3,978,455	+		ABZR86_RS17625	0.14	+0.4
3,978,455	+		ABZR86_RS17625	0.14	+0.4
3,978,455	+		ABZR86_RS17625	0.14	-0.3
3,978,455	+		ABZR86_RS17625	0.14	+1.3
3,978,455	+		ABZR86_RS17625	0.14	+0.1
3,978,456	-		ABZR86_RS17625	0.14	+0.3
3,978,456	-		ABZR86_RS17625	0.14	+0.8
3,978,456	-		ABZR86_RS17625	0.14	+0.4
3,978,456	-		ABZR86_RS17625	0.14	+0.7
3,978,500	+		ABZR86_RS17625	0.15	-0.6
3,978,521	+		ABZR86_RS17625	0.16	+0.0
3,978,521	+		ABZR86_RS17625	0.16	+0.4
3,978,521	+		ABZR86_RS17625	0.16	+0.3
3,978,522	-		ABZR86_RS17625	0.16	-0.2
3,978,522	-		ABZR86_RS17625	0.16	+0.4
3,978,583	+		ABZR86_RS17625	0.18	+0.9
3,978,584	-		ABZR86_RS17625	0.18	+0.1
3,978,584	-		ABZR86_RS17625	0.18	-0.1
3,978,633	-		ABZR86_RS17625	0.19	-0.4
3,978,633	-		ABZR86_RS17625	0.19	-0.5
3,978,633	-		ABZR86_RS17625	0.19	+0.9
3,978,734	+		ABZR86_RS17625	0.22	-1.0
3,978,734	+		ABZR86_RS17625	0.22	+0.0
3,978,734	+		ABZR86_RS17625	0.22	-0.3
3,978,734	+		ABZR86_RS17625	0.22	+0.2
3,978,768	-		ABZR86_RS17625	0.23	+0.8
3,978,827	+		ABZR86_RS17625	0.25	+1.5
3,978,827	+		ABZR86_RS17625	0.25	+0.2
3,978,827	+		ABZR86_RS17625	0.25	+0.8
3,978,827	+		ABZR86_RS17625	0.25	-0.2
3,978,828	-		ABZR86_RS17625	0.25	+0.6
3,978,828	-		ABZR86_RS17625	0.25	+0.6
3,978,859	+		ABZR86_RS17625	0.26	-0.2
3,978,882	-		ABZR86_RS17625	0.27	+0.1
3,978,911	+		ABZR86_RS17625	0.28	+0.7
3,978,911	+		ABZR86_RS17625	0.28	-0.1
3,978,912	-		ABZR86_RS17625	0.28	-1.5
3,978,912	-		ABZR86_RS17625	0.28	+0.2
3,978,971	+		ABZR86_RS17625	0.30	+0.5
3,978,998	+		ABZR86_RS17625	0.30	+0.0
3,978,998	+		ABZR86_RS17625	0.30	+0.3
3,979,002	+		ABZR86_RS17625	0.30	+0.1
3,979,004	+		ABZR86_RS17625	0.31	-0.5
3,979,026	-		ABZR86_RS17625	0.31	+0.2
3,979,038	-		ABZR86_RS17625	0.32	+0.6
3,979,038	-		ABZR86_RS17625	0.32	+0.5
3,979,070	+		ABZR86_RS17625	0.33	+0.4
3,979,070	+		ABZR86_RS17625	0.33	-0.1
3,979,070	+		ABZR86_RS17625	0.33	+0.6
3,979,124	+		ABZR86_RS17625	0.34	+0.5
3,979,124	+		ABZR86_RS17625	0.34	-0.1
3,979,202	+		ABZR86_RS17625	0.37	+0.4
3,979,310	+		ABZR86_RS17625	0.40	+0.4
3,979,385	+		ABZR86_RS17625	0.42	-0.3
3,979,442	+		ABZR86_RS17625	0.44	-0.2
3,979,442	+		ABZR86_RS17625	0.44	+0.7
3,979,443	-		ABZR86_RS17625	0.44	+1.0
3,979,548	-		ABZR86_RS17625	0.47	+0.7
3,979,580	+		ABZR86_RS17625	0.48	+1.3
3,979,581	-		ABZR86_RS17625	0.48	+0.5
3,979,584	+		ABZR86_RS17625	0.48	+1.1
3,979,584	+		ABZR86_RS17625	0.48	+0.6
3,979,584	+		ABZR86_RS17625	0.48	+0.4
3,979,584	+		ABZR86_RS17625	0.48	+0.1
3,979,584	+		ABZR86_RS17625	0.48	+0.7
3,979,587	-		ABZR86_RS17625	0.48	+0.4
3,979,587	-		ABZR86_RS17625	0.48	+1.1
3,979,652	+		ABZR86_RS17625	0.50	+0.6
3,979,653	-		ABZR86_RS17625	0.50	+0.9
3,979,653	-		ABZR86_RS17625	0.50	+0.3
3,979,739	+		ABZR86_RS17625	0.53	+0.3
3,979,739	+		ABZR86_RS17625	0.53	+0.4
3,979,739	+		ABZR86_RS17625	0.53	+0.2
3,979,739	+		ABZR86_RS17625	0.53	-0.2
3,979,739	+		ABZR86_RS17625	0.53	+0.3
3,979,739	+		ABZR86_RS17625	0.53	+0.5
3,979,739	+		ABZR86_RS17625	0.53	+0.3
3,979,740	-		ABZR86_RS17625	0.53	+0.5
3,979,743	+		ABZR86_RS17625	0.53	-0.1
3,979,743	+		ABZR86_RS17625	0.53	+0.2
3,979,743	+		ABZR86_RS17625	0.53	+0.2
3,979,743	+		ABZR86_RS17625	0.53	-0.3
3,979,743	+		ABZR86_RS17625	0.53	+0.8
3,979,743	+		ABZR86_RS17625	0.53	-0.1
3,979,744	-		ABZR86_RS17625	0.53	+1.2
3,979,744	-		ABZR86_RS17625	0.53	+0.1
3,979,744	-		ABZR86_RS17625	0.53	+0.5
3,979,744	-		ABZR86_RS17625	0.53	+0.1
3,979,745	+		ABZR86_RS17625	0.53	+0.0
3,979,746	-		ABZR86_RS17625	0.53	+0.3
3,979,746	-		ABZR86_RS17625	0.53	+0.3
3,979,746	-		ABZR86_RS17625	0.53	+0.6
3,979,750	-		ABZR86_RS17625	0.53	-0.2
3,979,750	-		ABZR86_RS17625	0.53	+1.0
3,979,800	-		ABZR86_RS17625	0.55	+0.1
3,979,805	+		ABZR86_RS17625	0.55	+0.1
3,979,862	+		ABZR86_RS17625	0.57	+0.2
3,979,863	-		ABZR86_RS17625	0.57	+0.4
3,979,863	-		ABZR86_RS17625	0.57	+0.3
3,979,863	-		ABZR86_RS17625	0.57	-0.1
3,979,863	-		ABZR86_RS17625	0.57	+0.2
3,979,868	+		ABZR86_RS17625	0.57	+0.3
3,979,868	+		ABZR86_RS17625	0.57	+0.4
3,979,868	+		ABZR86_RS17625	0.57	-0.5
3,979,869	-		ABZR86_RS17625	0.57	+0.5
3,979,906	+		ABZR86_RS17625	0.58	-0.2
3,979,907	-		ABZR86_RS17625	0.58	+0.2
3,979,907	-		ABZR86_RS17625	0.58	+0.5
3,979,925	+		ABZR86_RS17625	0.59	+0.3
3,979,926	-		ABZR86_RS17625	0.59	+0.0
3,979,926	-		ABZR86_RS17625	0.59	+1.4
3,979,926	-		ABZR86_RS17625	0.59	+0.4
3,979,929	+		ABZR86_RS17625	0.59	+0.5
3,979,930	-		ABZR86_RS17625	0.59	+0.8
3,979,930	-		ABZR86_RS17625	0.59	+0.9
3,979,930	-		ABZR86_RS17625	0.59	-0.4
3,979,931	+		ABZR86_RS17625	0.59	+0.5
3,979,931	+		ABZR86_RS17625	0.59	-0.4
3,979,931	+		ABZR86_RS17625	0.59	-0.3
3,979,932	-		ABZR86_RS17625	0.59	+0.3
3,979,988	+		ABZR86_RS17625	0.61	+0.6
3,979,994	+		ABZR86_RS17625	0.61	+0.7
3,979,995	-		ABZR86_RS17625	0.61	+0.2
3,980,051	+		ABZR86_RS17625	0.63	+0.5
3,980,051	+		ABZR86_RS17625	0.63	+0.1
3,980,114	+		ABZR86_RS17625	0.64	+0.7
3,980,114	+		ABZR86_RS17625	0.64	-0.1
3,980,114	+		ABZR86_RS17625	0.64	+0.6
3,980,115	-		ABZR86_RS17625	0.64	+1.3
3,980,115	-		ABZR86_RS17625	0.64	+0.1
3,980,115	-		ABZR86_RS17625	0.64	+0.1
3,980,115	-		ABZR86_RS17625	0.64	-0.1
3,980,120	+		ABZR86_RS17625	0.65	-0.4
3,980,121	-		ABZR86_RS17625	0.65	+1.7
3,980,195	+		ABZR86_RS17625	0.67	+0.7
3,980,204	-		ABZR86_RS17625	0.67	-0.2
3,980,398	-		ABZR86_RS17625	0.73	-1.2
3,980,398	-		ABZR86_RS17625	0.73	+0.5
3,980,596	-		ABZR86_RS17625	0.79	+0.5
3,980,630	+		ABZR86_RS17625	0.80	+0.1
3,980,631	-		ABZR86_RS17625	0.80	+0.2
3,980,631	-		ABZR86_RS17625	0.80	+0.6
3,980,795	+		ABZR86_RS17625	0.85	+0.1
3,980,825	+		ABZR86_RS17625	0.86	+0.1
3,980,826	-		ABZR86_RS17625	0.86	+0.3
3,980,943	-		ABZR86_RS17625	0.90	-0.3
3,981,014	+				-0.6
3,981,014	+				+0.0
3,981,349	+				+0.3
3,981,355	+				+0.4
3,981,355	+				+0.6
3,981,355	+				+0.1
3,981,355	+				-0.3
3,981,430	+				-0.7
3,981,431	-				-0.3
3,981,493	+				+0.4
3,981,496	+				-0.7
3,981,497	-				+0.2
3,981,497	-				+0.5
3,981,497	-				+0.0
3,981,500	+				+0.8
3,981,500	+				+0.6
3,981,559	+		ABZR86_RS17630	0.12	+0.4
3,981,559	+		ABZR86_RS17630	0.12	-0.5
3,981,565	+		ABZR86_RS17630	0.12	+0.8
3,981,565	+		ABZR86_RS17630	0.12	+0.8
3,981,566	-		ABZR86_RS17630	0.12	+1.8
3,981,631	+		ABZR86_RS17630	0.15	-0.3
3,981,631	+		ABZR86_RS17630	0.15	+0.9
3,981,631	+		ABZR86_RS17630	0.15	+0.1
3,981,701	+		ABZR86_RS17630	0.18	-0.1
3,981,702	-		ABZR86_RS17630	0.18	-0.4
3,981,778	+		ABZR86_RS17630	0.21	+0.3
3,981,778	+		ABZR86_RS17630	0.21	+0.5
3,981,778	+		ABZR86_RS17630	0.21	+0.9
3,981,778	+		ABZR86_RS17630	0.21	+0.3
3,981,778	+		ABZR86_RS17630	0.21	-0.0
3,981,874	+		ABZR86_RS17630	0.25	-0.2
3,981,922	+		ABZR86_RS17630	0.27	-0.1
3,981,922	+		ABZR86_RS17630	0.27	+0.6
3,981,923	-		ABZR86_RS17630	0.27	+0.0
3,981,923	-		ABZR86_RS17630	0.27	+0.5
3,981,937	+		ABZR86_RS17630	0.28	-0.0
3,981,937	+		ABZR86_RS17630	0.28	+0.2
3,981,938	-		ABZR86_RS17630	0.28	-0.0
3,981,938	-		ABZR86_RS17630	0.28	-0.1
3,981,994	-		ABZR86_RS17630	0.30	-0.2
3,981,994	-		ABZR86_RS17630	0.30	+0.1
3,982,058	+		ABZR86_RS17630	0.33	+0.6
3,982,058	+		ABZR86_RS17630	0.33	+0.4
3,982,058	+		ABZR86_RS17630	0.33	+1.4
3,982,058	+		ABZR86_RS17630	0.33	+0.1
3,982,058	+		ABZR86_RS17630	0.33	+0.2
3,982,059	-		ABZR86_RS17630	0.33	-0.1
3,982,059	-		ABZR86_RS17630	0.33	+0.3
3,982,059	-		ABZR86_RS17630	0.33	+0.2
3,982,059	-		ABZR86_RS17630	0.33	+0.2
3,982,059	-		ABZR86_RS17630	0.33	-0.6
3,982,059	-		ABZR86_RS17630	0.33	+0.5
3,982,059	-		ABZR86_RS17630	0.33	-0.2
3,982,059	-		ABZR86_RS17630	0.33	+0.6
3,982,060	+		ABZR86_RS17630	0.33	+0.6
3,982,060	+		ABZR86_RS17630	0.33	-0.1
3,982,060	+		ABZR86_RS17630	0.33	-0.5
3,982,159	+		ABZR86_RS17630	0.37	+0.8
3,982,168	-		ABZR86_RS17630	0.38	-0.5
3,982,188	-		ABZR86_RS17630	0.39	+0.6
3,982,255	+		ABZR86_RS17630	0.41	+1.3
3,982,256	-		ABZR86_RS17630	0.41	+0.6