Experiment: Ceftazidime 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS17060 and ABZR86_RS17065 are separated by 107 nucleotides ABZR86_RS17065 and ABZR86_RS17070 are separated by 125 nucleotides
ABZR86_RS17060: ABZR86_RS17060 - zinc-ribbon and DUF3426 domain-containing protein, at 3,855,217 to 3,856,014
_RS17060
ABZR86_RS17065: ABZR86_RS17065 - 50S ribosomal protein L11 methyltransferase, at 3,856,122 to 3,857,024
_RS17065
ABZR86_RS17070: ABZR86_RS17070 - acetyl-CoA carboxylase biotin carboxylase subunit, at 3,857,150 to 3,858,526
_RS17070
Position (kb)
3856
3857
3858 Strain fitness (log2 ratio)
-2
-1
0
1 at 3855.135 kb on - strand at 3855.160 kb on + strand at 3855.161 kb on - strand at 3855.218 kb on + strand at 3855.336 kb on - strand, within ABZR86_RS17060 at 3856.010 kb on + strand at 3856.010 kb on + strand at 3856.010 kb on + strand at 3856.010 kb on + strand at 3856.011 kb on - strand at 3856.011 kb on - strand at 3856.020 kb on - strand at 3856.023 kb on + strand at 3856.023 kb on + strand at 3856.023 kb on + strand at 3856.023 kb on + strand at 3856.023 kb on + strand at 3856.024 kb on - strand at 3856.047 kb on + strand at 3856.048 kb on - strand at 3856.048 kb on - strand at 3856.048 kb on - strand at 3856.123 kb on + strand at 3856.124 kb on - strand at 3856.124 kb on - strand at 3856.124 kb on - strand at 3856.124 kb on - strand at 3856.124 kb on - strand at 3856.201 kb on + strand at 3856.201 kb on + strand at 3856.201 kb on + strand at 3856.513 kb on + strand, within ABZR86_RS17065 at 3856.667 kb on - strand, within ABZR86_RS17065 at 3856.751 kb on - strand, within ABZR86_RS17065 at 3857.070 kb on + strand at 3857.070 kb on + strand at 3857.070 kb on + strand at 3857.070 kb on + strand at 3857.070 kb on + strand at 3857.071 kb on - strand at 3857.071 kb on - strand at 3857.071 kb on - strand at 3857.071 kb on - strand at 3857.071 kb on - strand at 3857.071 kb on - strand at 3857.071 kb on - strand at 3857.071 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ceftazidime 0.1 mg/ml remove 3,855,135 - -0.2 3,855,160 + +1.2 3,855,161 - -0.5 3,855,218 + -0.1 3,855,336 - ABZR86_RS17060 0.15 -0.4 3,856,010 + -0.3 3,856,010 + +0.2 3,856,010 + -0.4 3,856,010 + -0.4 3,856,011 - -0.0 3,856,011 - -0.4 3,856,020 - -0.3 3,856,023 + -0.1 3,856,023 + -0.8 3,856,023 + +0.3 3,856,023 + +0.7 3,856,023 + -0.0 3,856,024 - -1.3 3,856,047 + +0.1 3,856,048 - +0.1 3,856,048 - +0.4 3,856,048 - +0.2 3,856,123 + +0.1 3,856,124 - -0.1 3,856,124 - -0.1 3,856,124 - -1.3 3,856,124 - -0.4 3,856,124 - -0.8 3,856,201 + -0.5 3,856,201 + -0.8 3,856,201 + +1.6 3,856,513 + ABZR86_RS17065 0.43 +0.4 3,856,667 - ABZR86_RS17065 0.60 -0.1 3,856,751 - ABZR86_RS17065 0.70 -0.6 3,857,070 + -2.0 3,857,070 + -0.1 3,857,070 + -0.7 3,857,070 + +0.5 3,857,070 + -0.2 3,857,071 - -1.0 3,857,071 - +0.6 3,857,071 - +0.4 3,857,071 - -0.2 3,857,071 - -0.7 3,857,071 - -0.6 3,857,071 - +0.4 3,857,071 - -0.6
Or see this region's nucleotide sequence