Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS14135

Experiment: Ceftazidime 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.1 mg/ml
3,150,909	-				+0.4
3,151,006	+				-0.1
3,151,091	+				-0.1
3,151,091	+				+0.9
3,151,194	+				+0.1
3,151,195	-				+0.4
3,151,204	+				+0.6
3,151,205	-				+1.2
3,151,205	-				-0.6
3,151,208	+				-0.4
3,151,208	+				+0.3
3,151,208	+				+0.4
3,151,208	+				+0.5
3,151,208	+				+1.1
3,151,208	+				-0.2
3,151,208	+				+0.1
3,151,209	-				-0.4
3,151,209	-				+0.5
3,151,209	-				+0.6
3,151,209	-				+0.4
3,151,209	-				+0.8
3,151,209	-				-0.2
3,151,209	-				-0.0
3,151,209	-				+0.5
3,151,262	-				+0.7
3,151,262	-				-0.2
3,151,497	+		ABZR86_RS14135	0.23	-0.1
3,151,497	+		ABZR86_RS14135	0.23	+0.6
3,151,497	+		ABZR86_RS14135	0.23	+0.5
3,151,498	-		ABZR86_RS14135	0.23	+0.2
3,151,498	-		ABZR86_RS14135	0.23	+0.0
3,151,513	-		ABZR86_RS14135	0.25	+1.0
3,151,878	+		ABZR86_RS14135	0.54	+0.1
3,151,893	+		ABZR86_RS14135	0.56	+0.3
3,151,893	+		ABZR86_RS14135	0.56	+0.7
3,151,893	+		ABZR86_RS14135	0.56	+0.3
3,151,894	-		ABZR86_RS14135	0.56	+0.1
3,151,894	-		ABZR86_RS14135	0.56	+0.3
3,151,894	-		ABZR86_RS14135	0.56	-0.2
3,151,895	+		ABZR86_RS14135	0.56	+0.0
3,151,896	-		ABZR86_RS14135	0.56	-0.4
3,151,896	-		ABZR86_RS14135	0.56	+0.4
3,152,061	+		ABZR86_RS14135	0.69	-0.4
3,152,062	-		ABZR86_RS14135	0.69	+0.1
3,152,367	+				+0.2
3,152,367	+				+1.5
3,152,367	+				+0.8
3,152,368	-				+1.4
3,152,459	+				-0.6
3,152,459	+				+0.2
3,152,460	-				+0.3
3,152,651	+		ABZR86_RS14140	0.27	+1.0
3,152,651	+		ABZR86_RS14140	0.27	+0.7
3,152,652	-		ABZR86_RS14140	0.27	+2.1
3,152,652	-		ABZR86_RS14140	0.27	+0.9
3,152,817	+		ABZR86_RS14140	0.49	+0.3
3,152,834	+		ABZR86_RS14140	0.51	+0.2
3,152,834	+		ABZR86_RS14140	0.51	+0.7
3,152,835	-		ABZR86_RS14140	0.51	-0.5
3,152,850	+		ABZR86_RS14140	0.53	-0.1
3,152,956	+		ABZR86_RS14140	0.67	+0.4
3,152,957	-		ABZR86_RS14140	0.67	+0.1
3,153,067	+		ABZR86_RS14140	0.81	+0.5
3,153,116	+		ABZR86_RS14140	0.88	+0.4
3,153,183	+				+0.8
3,153,184	-				-0.2
3,153,184	-				+0.3
3,153,208	+				+0.7
3,153,266	+				+0.3
3,153,266	+				-0.4
3,153,311	+				-0.0
3,153,312	-				+0.8