Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS13995

Experiment: Ceftazidime 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.1 mg/ml
3,118,114	+		ABZR86_RS13990	0.87	+0.5
3,118,284	-				+0.3
3,118,284	-				+0.4
3,118,289	+				+0.0
3,118,290	-				+0.6
3,118,290	-				-0.1
3,118,290	-				+1.5
3,118,290	-				-0.0
3,118,293	+				+0.6
3,118,293	+				+0.2
3,118,293	+				+0.1
3,118,293	+				+0.3
3,118,293	+				+0.5
3,118,293	+				+0.1
3,118,294	-				+0.3
3,118,294	-				-0.0
3,118,294	-				-0.4
3,118,294	-				+0.6
3,118,375	+				+1.1
3,118,376	-				+0.2
3,118,376	-				+0.1
3,118,384	-				+0.3
3,118,384	-				+0.1
3,118,453	-				+0.6
3,118,453	-				+0.4
3,118,556	+		ABZR86_RS13995	0.12	+0.7
3,118,557	-		ABZR86_RS13995	0.12	-0.5
3,118,564	+		ABZR86_RS13995	0.16	-0.1
3,118,565	-		ABZR86_RS13995	0.16	+0.5
3,118,565	-		ABZR86_RS13995	0.16	+0.6
3,118,594	+		ABZR86_RS13995	0.30	+1.0
3,118,595	-		ABZR86_RS13995	0.30	+1.0
3,118,595	-		ABZR86_RS13995	0.30	+0.5
3,118,666	+		ABZR86_RS13995	0.64	+0.4
3,118,666	+		ABZR86_RS13995	0.64	+0.6
3,118,666	+		ABZR86_RS13995	0.64	+0.0
3,118,667	-		ABZR86_RS13995	0.65	-0.4
3,118,667	-		ABZR86_RS13995	0.65	+0.2
3,118,713	-		ABZR86_RS13995	0.87	-0.1
3,118,757	+				-0.3
3,118,758	-				+0.2
3,118,868	+				+1.2
3,118,868	+				+0.5
3,118,958	+		ABZR86_RS14000	0.15	+0.1
3,118,958	+		ABZR86_RS14000	0.15	+0.3
3,118,958	+		ABZR86_RS14000	0.15	+0.1
3,118,958	+		ABZR86_RS14000	0.15	+0.4
3,118,959	-		ABZR86_RS14000	0.15	+0.6
3,118,973	+		ABZR86_RS14000	0.17	+0.2
3,118,973	+		ABZR86_RS14000	0.17	+0.1
3,118,978	-		ABZR86_RS14000	0.18	+0.6
3,119,033	+		ABZR86_RS14000	0.27	+0.3
3,119,033	+		ABZR86_RS14000	0.27	+0.4
3,119,033	+		ABZR86_RS14000	0.27	-0.2
3,119,034	-		ABZR86_RS14000	0.27	+1.2
3,119,036	+		ABZR86_RS14000	0.27	+0.2
3,119,036	+		ABZR86_RS14000	0.27	+0.2
3,119,037	-		ABZR86_RS14000	0.27	-0.0
3,119,037	-		ABZR86_RS14000	0.27	+0.3
3,119,037	-		ABZR86_RS14000	0.27	+0.0
3,119,060	+		ABZR86_RS14000	0.31	+0.5
3,119,060	+		ABZR86_RS14000	0.31	+0.7
3,119,060	+		ABZR86_RS14000	0.31	+0.4
3,119,060	+		ABZR86_RS14000	0.31	+0.0
3,119,060	+		ABZR86_RS14000	0.31	+0.1
3,119,060	+		ABZR86_RS14000	0.31	+0.3
3,119,060	+		ABZR86_RS14000	0.31	+1.7
3,119,060	+		ABZR86_RS14000	0.31	+1.0
3,119,060	+		ABZR86_RS14000	0.31	+0.2
3,119,061	-		ABZR86_RS14000	0.31	+0.3
3,119,061	-		ABZR86_RS14000	0.31	+0.2
3,119,069	+		ABZR86_RS14000	0.32	-0.1
3,119,069	+		ABZR86_RS14000	0.32	+0.5
3,119,069	+		ABZR86_RS14000	0.32	+0.2
3,119,069	+		ABZR86_RS14000	0.32	+0.5
3,119,069	+		ABZR86_RS14000	0.32	+0.5
3,119,070	-		ABZR86_RS14000	0.32	-0.1
3,119,165	-		ABZR86_RS14000	0.47	+0.3
3,119,168	+		ABZR86_RS14000	0.48	+0.7
3,119,168	+		ABZR86_RS14000	0.48	+0.2
3,119,168	+		ABZR86_RS14000	0.48	+0.7
3,119,168	+		ABZR86_RS14000	0.48	+0.3
3,119,169	-		ABZR86_RS14000	0.48	-0.2
3,119,169	-		ABZR86_RS14000	0.48	+0.1
3,119,169	-		ABZR86_RS14000	0.48	+0.2
3,119,169	-		ABZR86_RS14000	0.48	-0.4
3,119,220	+		ABZR86_RS14000	0.56	+0.8
3,119,220	+		ABZR86_RS14000	0.56	+0.1
3,119,221	-		ABZR86_RS14000	0.56	-0.1
3,119,287	+		ABZR86_RS14000	0.67	+0.1
3,119,287	+		ABZR86_RS14000	0.67	+0.4
3,119,287	+		ABZR86_RS14000	0.67	+0.4
3,119,288	-		ABZR86_RS14000	0.67	-2.1
3,119,288	-		ABZR86_RS14000	0.67	+1.0
3,119,549	+				-0.1
3,119,549	+				+0.7
3,119,550	-				-0.2
3,119,550	-				+0.4
3,119,554	+				+0.4
3,119,641	-		ABZR86_RS14005	0.18	-0.3
3,119,679	+		ABZR86_RS14005	0.26	-0.0