Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS09440

Experiment: Ceftazidime 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.1 mg/ml
2,100,666	+				+0.2
2,100,666	+				-0.2
2,100,877	+		ABZR86_RS09430	0.63	-0.0
2,100,878	-		ABZR86_RS09430	0.64	-0.2
2,100,878	-		ABZR86_RS09430	0.64	-0.1
2,100,878	-		ABZR86_RS09430	0.64	-0.0
2,100,898	+		ABZR86_RS09430	0.70	-0.3
2,100,898	+		ABZR86_RS09430	0.70	+0.1
2,100,899	-		ABZR86_RS09430	0.70	+0.3
2,100,899	-		ABZR86_RS09430	0.70	-0.2
2,100,931	+		ABZR86_RS09430	0.80	-0.0
2,100,979	+				-0.7
2,100,979	+				-0.2
2,100,980	-				-0.1
2,101,531	+				-0.6
2,101,532	-				+0.1
2,101,564	+				+0.1
2,101,564	+				-0.1
2,101,565	-				-0.1
2,101,565	-				-0.6
2,101,687	+				+0.3
2,101,687	+				-0.0
2,101,687	+				-0.5
2,101,688	-				-0.8
2,101,688	-				-0.6
2,101,846	+		ABZR86_RS09440	0.23	+0.1
2,101,846	+		ABZR86_RS09440	0.23	+0.2
2,101,847	-		ABZR86_RS09440	0.23	-0.1
2,102,077	+		ABZR86_RS09440	0.46	+0.1
2,102,077	+		ABZR86_RS09440	0.46	+0.9
2,102,077	+		ABZR86_RS09440	0.46	+0.7
2,102,078	-		ABZR86_RS09440	0.46	+0.7
2,102,262	-		ABZR86_RS09440	0.65	+1.2
2,102,262	-		ABZR86_RS09440	0.65	+0.7
2,102,449	+		ABZR86_RS09440	0.83	-0.5
2,102,450	-		ABZR86_RS09440	0.83	-0.4
2,102,482	+		ABZR86_RS09440	0.87	-0.0
2,102,483	-		ABZR86_RS09440	0.87	+0.3
2,102,483	-		ABZR86_RS09440	0.87	+1.0
2,102,531	-				-0.2
2,102,531	-				+0.1
2,102,658	-				+0.7
2,102,671	+				+0.3
2,102,747	+		ABZR86_RS09445	0.10	+0.3
2,102,748	-		ABZR86_RS09445	0.10	-0.4
2,102,748	-		ABZR86_RS09445	0.10	+0.3
2,102,748	-		ABZR86_RS09445	0.10	+0.1
2,102,748	-		ABZR86_RS09445	0.10	+0.1
2,102,768	+		ABZR86_RS09445	0.14	-0.7
2,102,769	-		ABZR86_RS09445	0.14	+0.7
2,102,777	+		ABZR86_RS09445	0.15	-0.6
2,102,777	+		ABZR86_RS09445	0.15	+0.1
2,102,777	+		ABZR86_RS09445	0.15	+0.7
2,102,777	+		ABZR86_RS09445	0.15	+0.2
2,102,778	-		ABZR86_RS09445	0.15	-0.1
2,102,778	-		ABZR86_RS09445	0.15	-0.3
2,102,778	-		ABZR86_RS09445	0.15	-0.3
2,102,781	-		ABZR86_RS09445	0.16	-0.4
2,103,164	+		ABZR86_RS09445	0.82	+0.7
2,103,164	+		ABZR86_RS09445	0.82	-0.3
2,103,164	+		ABZR86_RS09445	0.82	-0.2
2,103,164	+		ABZR86_RS09445	0.82	+0.4
2,103,164	+		ABZR86_RS09445	0.82	-0.2
2,103,165	-		ABZR86_RS09445	0.82	+0.4
2,103,191	+		ABZR86_RS09445	0.87	-2.4
2,103,192	-		ABZR86_RS09445	0.87	-0.1
2,103,239	+				+0.3
2,103,240	-				+1.3
2,103,271	+				-0.9
2,103,303	+				-1.8
2,103,303	+				+0.1
2,103,303	+				-0.3
2,103,303	+				-0.8
2,103,303	+				+0.5
2,103,303	+				-0.1
2,103,303	+				-0.7
2,103,304	-				+0.7
2,103,304	-				+0.1