Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS09425

Experiment: Ceftazidime 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.1 mg/ml
2,098,784	+				-0.6
2,099,953	+		ABZR86_RS09425	0.23	+1.5
2,099,954	-		ABZR86_RS09425	0.23	+0.1
2,100,058	+		ABZR86_RS09425	0.36	-0.0
2,100,058	+		ABZR86_RS09425	0.36	-0.4
2,100,058	+		ABZR86_RS09425	0.36	-0.3
2,100,059	-		ABZR86_RS09425	0.36	-0.3
2,100,059	-		ABZR86_RS09425	0.36	+0.2
2,100,059	-		ABZR86_RS09425	0.36	-0.3
2,100,142	+		ABZR86_RS09425	0.46	+0.5
2,100,142	+		ABZR86_RS09425	0.46	+0.4
2,100,142	+		ABZR86_RS09425	0.46	+0.1
2,100,143	-		ABZR86_RS09425	0.47	-0.8
2,100,143	-		ABZR86_RS09425	0.47	-0.2
2,100,151	+		ABZR86_RS09425	0.48	-0.4
2,100,152	-		ABZR86_RS09425	0.48	+0.3
2,100,152	-		ABZR86_RS09425	0.48	-0.4
2,100,217	+		ABZR86_RS09425	0.56	+0.6
2,100,217	+		ABZR86_RS09425	0.56	-0.3
2,100,217	+		ABZR86_RS09425	0.56	+0.6
2,100,217	+		ABZR86_RS09425	0.56	+0.1
2,100,217	+		ABZR86_RS09425	0.56	+0.8
2,100,218	-		ABZR86_RS09425	0.56	+0.2
2,100,229	+		ABZR86_RS09425	0.57	+0.6
2,100,229	+		ABZR86_RS09425	0.57	-0.8
2,100,406	+		ABZR86_RS09425	0.80	-0.0
2,100,407	-		ABZR86_RS09425	0.80	-0.3
2,100,460	+		ABZR86_RS09425	0.86	+0.2
2,100,460	+		ABZR86_RS09425	0.86	+0.3
2,100,461	-		ABZR86_RS09425	0.87	+0.6
2,100,566	-				-0.3
2,100,566	-				+0.0
2,100,566	-				+1.4
2,100,566	-				+0.1
2,100,666	+				+0.2
2,100,666	+				-0.2
2,100,877	+		ABZR86_RS09430	0.63	-0.0
2,100,878	-		ABZR86_RS09430	0.64	-0.2
2,100,878	-		ABZR86_RS09430	0.64	-0.1
2,100,878	-		ABZR86_RS09430	0.64	-0.0
2,100,898	+		ABZR86_RS09430	0.70	-0.3
2,100,898	+		ABZR86_RS09430	0.70	+0.1
2,100,899	-		ABZR86_RS09430	0.70	+0.3
2,100,899	-		ABZR86_RS09430	0.70	-0.2
2,100,931	+		ABZR86_RS09430	0.80	-0.0
2,100,979	+				-0.7
2,100,979	+				-0.2
2,100,980	-				-0.1
2,101,531	+				-0.6
2,101,532	-				+0.1
2,101,564	+				+0.1
2,101,564	+				-0.1
2,101,565	-				-0.1
2,101,565	-				-0.6