Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3180
Experiment: MoYLS4 with A22 0.0875 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with A22 0.0875 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,010,056 | + | -3.5 | |||
4,010,168 | + | -0.7 | |||
4,010,338 | - | +0.1 | |||
4,010,413 | + | DvMF_3179 | 0.25 | -0.0 | |
4,010,550 | + | DvMF_3179 | 0.53 | -2.0 | |
4,010,911 | - | +1.8 | |||
4,011,149 | + | DvMF_3180 | 0.28 | -1.3 | |
4,011,149 | + | DvMF_3180 | 0.28 | -3.3 | |
4,011,265 | - | DvMF_3180 | 0.43 | -1.4 | |
4,011,424 | - | DvMF_3180 | 0.65 | -0.2 | |
4,011,605 | - | DvMF_3180 | 0.89 | -0.9 | |
4,011,649 | + | -0.1 | |||
4,011,795 | - | -0.5 | |||
4,011,881 | - | -0.3 | |||
4,011,904 | - | -0.3 | |||
4,012,014 | - | -1.0 | |||
4,012,099 | - | -0.5 | |||
4,012,384 | - | DvMF_3181 | 0.17 | -1.2 | |
4,012,657 | + | DvMF_3181 | 0.30 | +0.5 |
Or see this region's nucleotide sequence