Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2881
Experiment: MoYLS4 with A22 0.0875 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with A22 0.0875 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,637,900 | - | -2.0 | |||
3,638,184 | + | DvMF_2880 | 0.34 | -2.0 | |
3,638,188 | + | DvMF_2880 | 0.35 | -0.2 | |
3,638,217 | + | DvMF_2880 | 0.38 | -0.9 | |
3,638,274 | - | DvMF_2880 | 0.45 | -0.6 | |
3,638,368 | - | DvMF_2880 | 0.56 | +0.1 | |
3,638,378 | - | DvMF_2880 | 0.57 | -5.3 | |
3,638,413 | + | DvMF_2880 | 0.62 | -1.1 | |
3,638,546 | - | DvMF_2880 | 0.78 | -0.8 | |
3,638,707 | + | -1.1 | |||
3,638,740 | - | DvMF_2881 | 0.15 | -0.7 | |
3,638,766 | + | DvMF_2881 | 0.20 | -0.4 | |
3,638,869 | - | DvMF_2881 | 0.44 | -1.5 | |
3,638,913 | + | DvMF_2881 | 0.54 | -0.5 | |
3,639,120 | + | -3.6 | |||
3,639,215 | - | DvMF_2882 | 0.12 | -0.6 | |
3,639,232 | - | DvMF_2882 | 0.14 | -1.0 | |
3,639,279 | + | DvMF_2882 | 0.19 | -2.7 | |
3,639,282 | - | DvMF_2882 | 0.19 | -0.1 | |
3,639,356 | - | DvMF_2882 | 0.28 | -1.2 |
Or see this region's nucleotide sequence