Experiment: MoYLS4 with A22 0.0875 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2190 and DvMF_2191 are separated by 27 nucleotides DvMF_2191 and DvMF_2192 are separated by 87 nucleotides DvMF_2192 and DvMF_2193 are separated by 97 nucleotides
DvMF_2190: DvMF_2190 - phosphonate ABC transporter, periplasmic phosphonate-binding protein (RefSeq), at 2,735,941 to 2,736,885
_2190
DvMF_2191: DvMF_2191 - hypothetical protein (RefSeq), at 2,736,913 to 2,737,626
_2191
DvMF_2192: DvMF_2192 - protein of unknown function DUF81 (RefSeq), at 2,737,714 to 2,738,856
_2192
DvMF_2193: DvMF_2193 - protein of unknown function DUF169 (RefSeq), at 2,738,954 to 2,739,730
_2193
Position (kb)
2737
2738
2739 Strain fitness (log2 ratio)
-2
-1
0
1 at 2736.968 kb on - strand at 2736.973 kb on - strand at 2737.022 kb on - strand, within DvMF_2191 at 2737.186 kb on + strand, within DvMF_2191 at 2737.191 kb on + strand, within DvMF_2191 at 2737.194 kb on - strand, within DvMF_2191 at 2737.199 kb on - strand, within DvMF_2191 at 2737.231 kb on - strand, within DvMF_2191 at 2737.265 kb on + strand, within DvMF_2191 at 2737.306 kb on + strand, within DvMF_2191 at 2737.321 kb on - strand, within DvMF_2191 at 2737.411 kb on - strand, within DvMF_2191 at 2737.534 kb on - strand, within DvMF_2191 at 2737.608 kb on - strand at 2737.638 kb on - strand at 2737.752 kb on + strand at 2738.096 kb on - strand, within DvMF_2192 at 2738.142 kb on + strand, within DvMF_2192 at 2738.289 kb on + strand, within DvMF_2192 at 2738.316 kb on + strand, within DvMF_2192 at 2738.524 kb on + strand, within DvMF_2192 at 2738.656 kb on + strand, within DvMF_2192 at 2738.675 kb on - strand, within DvMF_2192 at 2738.680 kb on - strand, within DvMF_2192 at 2738.856 kb on + strand at 2739.135 kb on - strand, within DvMF_2193 at 2739.254 kb on - strand, within DvMF_2193 at 2739.369 kb on + strand, within DvMF_2193 at 2739.377 kb on - strand, within DvMF_2193 at 2739.421 kb on + strand, within DvMF_2193 at 2739.509 kb on + strand, within DvMF_2193 at 2739.517 kb on - strand, within DvMF_2193 at 2739.517 kb on - strand, within DvMF_2193 at 2739.537 kb on + strand, within DvMF_2193 at 2739.579 kb on - strand, within DvMF_2193 at 2739.587 kb on - strand, within DvMF_2193 at 2739.606 kb on - strand, within DvMF_2193 at 2739.738 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with A22 0.0875 mg/ml remove 2,736,968 - +0.1 2,736,973 - -1.1 2,737,022 - DvMF_2191 0.15 -0.9 2,737,186 + DvMF_2191 0.38 -1.2 2,737,191 + DvMF_2191 0.39 -1.0 2,737,194 - DvMF_2191 0.39 -1.2 2,737,199 - DvMF_2191 0.40 -1.6 2,737,231 - DvMF_2191 0.45 -1.1 2,737,265 + DvMF_2191 0.49 -0.6 2,737,306 + DvMF_2191 0.55 -1.1 2,737,321 - DvMF_2191 0.57 -0.3 2,737,411 - DvMF_2191 0.70 -1.1 2,737,534 - DvMF_2191 0.87 -1.2 2,737,608 - -0.6 2,737,638 - -0.4 2,737,752 + -1.2 2,738,096 - DvMF_2192 0.33 -1.8 2,738,142 + DvMF_2192 0.37 +0.5 2,738,289 + DvMF_2192 0.50 -2.0 2,738,316 + DvMF_2192 0.53 -1.5 2,738,524 + DvMF_2192 0.71 -1.2 2,738,656 + DvMF_2192 0.82 -1.9 2,738,675 - DvMF_2192 0.84 -1.6 2,738,680 - DvMF_2192 0.85 -0.3 2,738,856 + -1.0 2,739,135 - DvMF_2193 0.23 -0.8 2,739,254 - DvMF_2193 0.39 -0.9 2,739,369 + DvMF_2193 0.53 -0.9 2,739,377 - DvMF_2193 0.54 -0.9 2,739,421 + DvMF_2193 0.60 -1.5 2,739,509 + DvMF_2193 0.71 -2.3 2,739,517 - DvMF_2193 0.72 -0.6 2,739,517 - DvMF_2193 0.72 -1.0 2,739,537 + DvMF_2193 0.75 -0.8 2,739,579 - DvMF_2193 0.80 +0.0 2,739,587 - DvMF_2193 0.81 -0.7 2,739,606 - DvMF_2193 0.84 -0.5 2,739,738 + -0.7
Or see this region's nucleotide sequence