Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1969
Experiment: MoYLS4 with A22 0.0875 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with A22 0.0875 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,433,737 | + | DvMF_1968 | 0.58 | -0.3 | |
2,433,756 | - | -0.8 | |||
2,433,756 | - | DvMF_1968 | 0.59 | -0.5 | |
2,433,924 | - | DvMF_1968 | 0.69 | -1.1 | |
2,433,937 | + | DvMF_1968 | 0.70 | -0.5 | |
2,433,983 | - | DvMF_1968 | 0.72 | -0.6 | |
2,433,983 | - | DvMF_1968 | 0.72 | -0.9 | |
2,434,243 | - | DvMF_1968 | 0.87 | +0.0 | |
2,434,260 | - | DvMF_1968 | 0.88 | +0.1 | |
2,434,374 | + | -0.8 | |||
2,434,374 | + | -0.1 | |||
2,434,390 | - | -0.7 | |||
2,434,482 | - | -0.5 | |||
2,434,745 | - | DvMF_1969 | 0.25 | -0.2 | |
2,435,138 | + | -1.2 | |||
2,435,143 | + | -0.6 | |||
2,435,143 | + | -0.9 | |||
2,435,176 | + | -0.7 | |||
2,435,176 | + | -1.0 | |||
2,435,184 | - | -1.7 | |||
2,435,184 | - | -0.1 | |||
2,435,212 | - | -0.3 | |||
2,435,245 | - | -0.8 | |||
2,435,330 | + | -0.3 | |||
2,435,330 | + | -1.1 | |||
2,435,414 | + | -1.3 | |||
2,435,427 | - | DvMF_1970 | 0.11 | -0.7 | |
2,435,460 | + | DvMF_1970 | 0.18 | -0.5 | |
2,435,463 | - | DvMF_1970 | 0.19 | -0.4 | |
2,435,596 | - | DvMF_1970 | 0.45 | -0.1 | |
2,435,831 | - | +0.3 | |||
2,435,885 | + | +0.8 | |||
2,435,885 | + | +0.5 | |||
2,435,895 | + | -0.7 |
Or see this region's nucleotide sequence