Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1915
Experiment: MoYLS4 with A22 0.0875 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with A22 0.0875 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,359,752 | - | DvMF_1914 | 0.25 | +0.8 | |
| 2,359,752 | - | DvMF_1914 | 0.25 | -0.3 | |
| 2,359,826 | - | DvMF_1914 | 0.31 | +0.0 | |
| 2,359,912 | + | DvMF_1914 | 0.38 | -0.4 | |
| 2,360,093 | + | DvMF_1914 | 0.53 | -0.5 | |
| 2,360,134 | + | DvMF_1914 | 0.57 | -0.6 | |
| 2,360,206 | + | DvMF_1914 | 0.63 | +0.7 | |
| 2,360,364 | + | DvMF_1914 | 0.76 | -0.4 | |
| 2,360,442 | + | DvMF_1914 | 0.83 | -0.6 | |
| 2,360,450 | - | DvMF_1914 | 0.84 | -0.3 | |
| 2,360,467 | + | DvMF_1914 | 0.85 | +0.0 | |
| 2,360,533 | - | -1.1 | |||
| 2,360,533 | - | +0.3 | |||
| 2,360,540 | - | -0.4 | |||
| 2,360,612 | - | -1.8 | |||
| 2,360,729 | - | DvMF_1915 | 0.13 | +0.9 | |
| 2,360,763 | - | DvMF_1915 | 0.25 | +0.1 | |
| 2,360,808 | - | DvMF_1915 | 0.40 | +0.1 | |
| 2,361,280 | + | -2.3 | |||
| 2,361,301 | + | -0.9 | |||
| 2,361,326 | + | -0.1 | |||
| 2,361,360 | + | -1.1 | |||
| 2,361,428 | - | DvMF_1916 | 0.12 | -1.3 | |
| 2,361,628 | + | DvMF_1916 | 0.37 | -0.8 | |
| 2,361,693 | - | DvMF_1916 | 0.45 | -0.7 | |
| 2,361,844 | + | DvMF_1916 | 0.64 | +1.2 |
Or see this region's nucleotide sequence