Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1359
Experiment: MoYLS4 with A22 0.0875 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with A22 0.0875 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,662,263 | - | DvMF_1358 | 0.85 | +1.3 | |
1,662,296 | - | DvMF_1358 | 0.87 | -2.1 | |
1,662,298 | - | DvMF_1358 | 0.87 | -0.4 | |
1,662,314 | + | DvMF_1358 | 0.89 | -2.0 | |
1,662,561 | - | -0.9 | |||
1,662,579 | - | +1.3 | |||
1,662,579 | - | -4.1 | |||
1,662,579 | - | -1.3 | |||
1,662,594 | + | -0.7 | |||
1,662,741 | - | +0.1 | |||
1,662,823 | - | -0.6 | |||
1,662,835 | + | -1.5 | |||
1,662,870 | + | -0.6 | |||
1,662,875 | + | -0.7 | |||
1,662,875 | + | -0.5 | |||
1,662,878 | - | -0.5 | |||
1,662,878 | - | -0.3 | |||
1,662,883 | - | -0.1 | |||
1,663,580 | + | DvMF_1359 | 0.58 | -1.5 | |
1,663,840 | + | DvMF_1359 | 0.87 | -0.7 | |
1,664,064 | + | -0.6 | |||
1,664,104 | - | -0.6 | |||
1,664,167 | - | DvMF_1360 | 0.13 | -0.1 | |
1,664,419 | - | DvMF_1360 | 0.29 | +0.0 | |
1,664,419 | - | DvMF_1360 | 0.29 | -0.8 |
Or see this region's nucleotide sequence