Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0870
Experiment: MoYLS4 with A22 0.0875 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with A22 0.0875 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,046,791 | + | DvMF_0868 | 0.88 | -0.4 | |
1,047,024 | - | DvMF_0869 | 0.20 | -0.4 | |
1,047,168 | - | DvMF_0869 | 0.81 | -0.5 | |
1,047,216 | - | -0.0 | |||
1,047,246 | - | +0.0 | |||
1,047,423 | - | -0.0 | |||
1,047,679 | + | DvMF_0870 | 0.16 | -0.0 | |
1,047,712 | + | DvMF_0870 | 0.17 | -1.9 | |
1,047,772 | - | DvMF_0870 | 0.20 | -0.4 | |
1,047,777 | + | DvMF_0870 | 0.20 | -0.6 | |
1,047,815 | + | DvMF_0870 | 0.22 | +0.0 | |
1,047,869 | + | DvMF_0870 | 0.24 | +0.4 | |
1,048,120 | + | DvMF_0870 | 0.35 | -0.7 | |
1,048,183 | - | DvMF_0870 | 0.38 | -0.5 | |
1,048,444 | - | DvMF_0870 | 0.49 | -1.2 | |
1,048,512 | - | DvMF_0870 | 0.52 | +0.7 | |
1,048,529 | + | DvMF_0870 | 0.53 | -0.8 | |
1,048,537 | - | DvMF_0870 | 0.54 | -2.9 | |
1,048,839 | + | DvMF_0870 | 0.67 | -0.4 | |
1,048,873 | + | DvMF_0870 | 0.68 | -0.7 | |
1,048,916 | - | DvMF_0870 | 0.70 | -0.5 | |
1,048,968 | - | DvMF_0870 | 0.72 | -0.1 | |
1,049,137 | - | DvMF_0870 | 0.80 | -0.4 | |
1,049,240 | + | DvMF_0870 | 0.84 | -0.9 | |
1,049,240 | + | DvMF_0870 | 0.84 | -0.1 | |
1,049,248 | - | DvMF_0870 | 0.85 | +0.4 | |
1,049,515 | + | -0.6 | |||
1,049,829 | - | -0.3 | |||
1,049,845 | + | -0.4 | |||
1,049,954 | - | +0.0 | |||
1,049,954 | - | -0.2 | |||
1,050,310 | - | DvMF_0871 | 0.21 | -2.6 |
Or see this region's nucleotide sequence