Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0868
Experiment: MoYLS4 with A22 0.0875 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with A22 0.0875 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,045,501 | + | DvMF_0867 | 0.33 | -0.4 | |
1,045,558 | + | DvMF_0867 | 0.44 | -0.7 | |
1,045,621 | - | DvMF_0867 | 0.56 | -3.2 | |
1,045,810 | + | +0.3 | |||
1,045,823 | - | -0.7 | |||
1,046,022 | - | -1.3 | |||
1,046,046 | + | +0.8 | |||
1,046,054 | - | +0.1 | |||
1,046,064 | - | -0.3 | |||
1,046,064 | - | -0.3 | |||
1,046,064 | - | -0.4 | |||
1,046,066 | + | -1.2 | |||
1,046,074 | - | -0.9 | |||
1,046,074 | - | -3.9 | |||
1,046,074 | - | -1.8 | |||
1,046,076 | + | -0.8 | |||
1,046,224 | + | -0.8 | |||
1,046,273 | + | -0.5 | |||
1,046,281 | - | +0.4 | |||
1,046,791 | + | DvMF_0868 | 0.88 | -0.4 | |
1,047,024 | - | DvMF_0869 | 0.20 | -0.4 | |
1,047,168 | - | DvMF_0869 | 0.81 | -0.5 | |
1,047,216 | - | -0.0 | |||
1,047,246 | - | +0.0 | |||
1,047,423 | - | -0.0 | |||
1,047,679 | + | DvMF_0870 | 0.16 | -0.0 | |
1,047,712 | + | DvMF_0870 | 0.17 | -1.9 | |
1,047,772 | - | DvMF_0870 | 0.20 | -0.4 | |
1,047,777 | + | DvMF_0870 | 0.20 | -0.6 | |
1,047,815 | + | DvMF_0870 | 0.22 | +0.0 |
Or see this region's nucleotide sequence