Experiment: MoYLS4 with A22 0.0875 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0670 and DvMF_0671 overlap by 26 nucleotides DvMF_0671 and DvMF_0672 are separated by 6 nucleotides DvMF_0672 and DvMF_0673 are separated by 64 nucleotides
DvMF_0670: DvMF_0670 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 809,764 to 811,125
_0670
DvMF_0671: DvMF_0671 - EpsI family protein (RefSeq), at 811,100 to 811,831
_0671
DvMF_0672: DvMF_0672 - eight transmembrane protein EpsH (RefSeq), at 811,838 to 812,692
_0672
DvMF_0673: DvMF_0673 - glycosyl transferase group 1 (RefSeq), at 812,757 to 813,872
_0673
Position (kb) 811
812
813 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 811.003 kb on + strand at 811.080 kb on - strand at 811.588 kb on - strand, within DvMF_0671 at 811.690 kb on + strand, within DvMF_0671 at 811.700 kb on + strand, within DvMF_0671 at 811.826 kb on - strand at 811.834 kb on + strand at 811.879 kb on - strand at 811.896 kb on - strand at 811.909 kb on - strand at 812.104 kb on + strand, within DvMF_0672 at 812.152 kb on + strand, within DvMF_0672 at 812.244 kb on + strand, within DvMF_0672 at 812.272 kb on - strand, within DvMF_0672 at 812.283 kb on + strand, within DvMF_0672 at 812.283 kb on + strand, within DvMF_0672 at 812.291 kb on - strand, within DvMF_0672 at 812.291 kb on - strand, within DvMF_0672 at 812.291 kb on - strand, within DvMF_0672 at 812.291 kb on - strand, within DvMF_0672 at 812.421 kb on - strand, within DvMF_0672 at 812.480 kb on - strand, within DvMF_0672 at 812.613 kb on + strand at 812.771 kb on + strand at 812.905 kb on + strand, within DvMF_0673 at 813.040 kb on + strand, within DvMF_0673 at 813.068 kb on + strand, within DvMF_0673 at 813.124 kb on + strand, within DvMF_0673 at 813.255 kb on + strand, within DvMF_0673 at 813.255 kb on + strand, within DvMF_0673 at 813.412 kb on - strand, within DvMF_0673 at 813.541 kb on + strand, within DvMF_0673 at 813.544 kb on - strand, within DvMF_0673 at 813.596 kb on + strand, within DvMF_0673 at 813.636 kb on + strand, within DvMF_0673 at 813.674 kb on - strand, within DvMF_0673
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with A22 0.0875 mg/ml remove 811,003 + -0.9 811,080 - -0.6 811,588 - DvMF_0671 0.67 +0.6 811,690 + DvMF_0671 0.81 +0.5 811,700 + DvMF_0671 0.82 -0.4 811,826 - -0.1 811,834 + -1.4 811,879 - -1.5 811,896 - -0.8 811,909 - -0.8 812,104 + DvMF_0672 0.31 +0.1 812,152 + DvMF_0672 0.37 +0.7 812,244 + DvMF_0672 0.47 -0.3 812,272 - DvMF_0672 0.51 -0.6 812,283 + DvMF_0672 0.52 -0.9 812,283 + DvMF_0672 0.52 -1.3 812,291 - DvMF_0672 0.53 -1.1 812,291 - DvMF_0672 0.53 -3.1 812,291 - DvMF_0672 0.53 -0.7 812,291 - DvMF_0672 0.53 -0.4 812,421 - DvMF_0672 0.68 -0.2 812,480 - DvMF_0672 0.75 -0.7 812,613 + -0.6 812,771 + -1.1 812,905 + DvMF_0673 0.13 -1.1 813,040 + DvMF_0673 0.25 -0.7 813,068 + DvMF_0673 0.28 +0.6 813,124 + DvMF_0673 0.33 -1.8 813,255 + DvMF_0673 0.45 +0.5 813,255 + DvMF_0673 0.45 -0.9 813,412 - DvMF_0673 0.59 -0.8 813,541 + DvMF_0673 0.70 -0.7 813,544 - DvMF_0673 0.71 +0.2 813,596 + DvMF_0673 0.75 +0.2 813,636 + DvMF_0673 0.79 -0.5 813,674 - DvMF_0673 0.82 -0.7
Or see this region's nucleotide sequence