Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0471
Experiment: MoYLS4 with A22 0.0875 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with A22 0.0875 mg/ml |
---|---|---|---|---|---|
remove | |||||
552,277 | + | DvMF_0470 | 0.73 | -1.1 | |
552,303 | - | DvMF_0470 | 0.75 | -0.8 | |
552,590 | - | DvMF_0470 | 0.88 | -0.1 | |
552,591 | + | DvMF_0470 | 0.88 | -0.9 | |
552,706 | + | +0.1 | |||
552,779 | + | -0.3 | |||
552,865 | + | -0.1 | |||
553,019 | + | -1.8 | |||
553,074 | + | -0.1 | |||
553,544 | + | +0.9 | |||
553,852 | - | DvMF_0471 | 0.41 | -1.7 | |
553,862 | - | DvMF_0471 | 0.41 | -1.7 | |
553,883 | + | DvMF_0471 | 0.43 | -1.4 | |
553,987 | - | DvMF_0471 | 0.50 | -1.4 | |
554,171 | + | DvMF_0471 | 0.62 | -0.1 | |
554,525 | - | DvMF_0471 | 0.86 | +0.1 | |
554,613 | - | -0.7 | |||
554,628 | + | +0.4 | |||
554,628 | + | -0.5 | |||
554,628 | + | +0.1 | |||
554,636 | - | -0.2 | |||
554,827 | - | -1.3 | |||
554,847 | - | DvMF_0472 | 0.11 | -1.1 | |
555,112 | + | DvMF_0472 | 0.39 | -2.4 | |
555,227 | - | DvMF_0472 | 0.51 | -0.8 | |
555,255 | + | DvMF_0472 | 0.53 | -0.6 | |
555,315 | - | DvMF_0472 | 0.60 | -0.9 | |
555,464 | + | DvMF_0472 | 0.75 | -0.3 | |
555,619 | - | -1.7 | |||
555,619 | - | -0.7 | |||
555,631 | - | -0.0 | |||
555,666 | + | -0.6 |
Or see this region's nucleotide sequence