Experiment: MoYLS4 with A22 0.0875 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0468 and DvMF_0469 are separated by 194 nucleotides DvMF_0469 and DvMF_0470 are separated by 371 nucleotides
DvMF_0468: DvMF_0468 - response regulator receiver protein (RefSeq), at 547,978 to 548,340
_0468
DvMF_0469: DvMF_0469 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 548,535 to 550,361
_0469
DvMF_0470: DvMF_0470 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 550,733 to 552,838
_0470
Position (kb) 548
549
550
551 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 547.655 kb on - strand at 547.825 kb on - strand at 547.846 kb on - strand at 547.851 kb on - strand at 548.154 kb on + strand, within DvMF_0468 at 548.154 kb on + strand, within DvMF_0468 at 548.154 kb on + strand, within DvMF_0468 at 548.162 kb on - strand, within DvMF_0468 at 548.246 kb on + strand, within DvMF_0468 at 548.265 kb on - strand, within DvMF_0468 at 548.285 kb on - strand, within DvMF_0468 at 548.285 kb on - strand, within DvMF_0468 at 548.304 kb on + strand at 548.343 kb on + strand at 548.401 kb on + strand at 548.401 kb on + strand at 548.470 kb on - strand at 548.812 kb on + strand, within DvMF_0469 at 548.844 kb on + strand, within DvMF_0469 at 548.852 kb on - strand, within DvMF_0469 at 548.979 kb on - strand, within DvMF_0469 at 549.365 kb on + strand, within DvMF_0469 at 549.368 kb on - strand, within DvMF_0469 at 549.480 kb on - strand, within DvMF_0469 at 549.582 kb on - strand, within DvMF_0469 at 549.666 kb on - strand, within DvMF_0469 at 549.782 kb on + strand, within DvMF_0469 at 549.859 kb on + strand, within DvMF_0469 at 549.859 kb on + strand, within DvMF_0469 at 549.867 kb on - strand, within DvMF_0469 at 550.533 kb on - strand at 550.788 kb on - strand at 550.940 kb on - strand at 550.946 kb on - strand, within DvMF_0470 at 551.165 kb on - strand, within DvMF_0470 at 551.280 kb on - strand, within DvMF_0470
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with A22 0.0875 mg/ml remove 547,655 - -1.2 547,825 - +1.2 547,846 - -1.1 547,851 - -0.6 548,154 + DvMF_0468 0.48 +1.9 548,154 + DvMF_0468 0.48 +1.5 548,154 + DvMF_0468 0.48 -0.4 548,162 - DvMF_0468 0.51 -0.1 548,246 + DvMF_0468 0.74 +0.4 548,265 - DvMF_0468 0.79 +0.4 548,285 - DvMF_0468 0.85 +1.7 548,285 - DvMF_0468 0.85 +2.4 548,304 + +2.9 548,343 + -0.8 548,401 + -0.8 548,401 + -0.8 548,470 - +0.1 548,812 + DvMF_0469 0.15 -0.4 548,844 + DvMF_0469 0.17 -0.7 548,852 - DvMF_0469 0.17 -0.4 548,979 - DvMF_0469 0.24 -0.0 549,365 + DvMF_0469 0.45 -0.3 549,368 - DvMF_0469 0.46 -1.0 549,480 - DvMF_0469 0.52 -0.3 549,582 - DvMF_0469 0.57 -0.8 549,666 - DvMF_0469 0.62 -0.2 549,782 + DvMF_0469 0.68 +0.2 549,859 + DvMF_0469 0.72 -0.5 549,859 + DvMF_0469 0.72 -1.0 549,867 - DvMF_0469 0.73 -0.7 550,533 - -0.7 550,788 - -0.6 550,940 - -2.3 550,946 - DvMF_0470 0.10 -0.6 551,165 - DvMF_0470 0.21 -1.0 551,280 - DvMF_0470 0.26 -1.5
Or see this region's nucleotide sequence