Experiment: BHIS with Chloride 350 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0756 and BT0757 are separated by 1 nucleotides BT0757 and BT0758 are separated by 223 nucleotides BT0758 and BT0759 are separated by 132 nucleotides
BT0756: BT0756 - iduronate 2-sulfatase precursor (NCBI ptt file), at 941,648 to 943,042
BT0756
BT0757: BT0757 - beta-galactosidase (NCBI ptt file), at 943,044 to 945,092
BT0757
BT0758: BT0758 - acetyltransferase (NCBI ptt file), at 945,316 to 945,888
BT0758
BT0759: BT0759 - hypothetical protein (NCBI ptt file), at 946,021 to 946,200
BT0759
Position (kb) 943
944
945
946 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 942.087 kb on - strand, within BT0756 at 942.412 kb on - strand, within BT0756 at 942.420 kb on - strand, within BT0756 at 942.420 kb on - strand, within BT0756 at 942.640 kb on + strand, within BT0756 at 942.641 kb on - strand, within BT0756 at 942.725 kb on - strand, within BT0756 at 942.985 kb on + strand at 943.058 kb on + strand at 943.196 kb on - strand at 943.257 kb on - strand, within BT0757 at 943.364 kb on + strand, within BT0757 at 943.458 kb on - strand, within BT0757 at 943.476 kb on - strand, within BT0757 at 943.476 kb on - strand, within BT0757 at 943.524 kb on + strand, within BT0757 at 943.575 kb on - strand, within BT0757 at 943.623 kb on - strand, within BT0757 at 943.679 kb on + strand, within BT0757 at 943.680 kb on - strand, within BT0757 at 943.757 kb on + strand, within BT0757 at 943.758 kb on - strand, within BT0757 at 943.760 kb on - strand, within BT0757 at 944.024 kb on - strand, within BT0757 at 944.112 kb on + strand, within BT0757 at 944.184 kb on + strand, within BT0757 at 944.267 kb on + strand, within BT0757 at 944.337 kb on + strand, within BT0757 at 944.378 kb on + strand, within BT0757 at 944.402 kb on + strand, within BT0757 at 944.489 kb on - strand, within BT0757 at 944.508 kb on - strand, within BT0757 at 944.593 kb on + strand, within BT0757 at 944.640 kb on + strand, within BT0757 at 944.651 kb on - strand, within BT0757 at 944.683 kb on - strand, within BT0757 at 944.685 kb on - strand, within BT0757 at 944.701 kb on + strand, within BT0757 at 944.708 kb on + strand, within BT0757 at 944.759 kb on + strand, within BT0757 at 944.960 kb on + strand at 944.979 kb on + strand at 945.071 kb on + strand at 945.088 kb on + strand at 945.161 kb on + strand at 945.276 kb on + strand at 945.330 kb on + strand at 945.343 kb on - strand at 945.375 kb on - strand, within BT0758 at 945.589 kb on + strand, within BT0758 at 945.606 kb on - strand, within BT0758 at 945.671 kb on + strand, within BT0758 at 946.023 kb on - strand at 946.025 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS with Chloride 350 mM remove 942,087 - BT0756 0.31 -1.2 942,412 - BT0756 0.55 +0.5 942,420 - BT0756 0.55 +0.6 942,420 - BT0756 0.55 -0.5 942,640 + BT0756 0.71 -1.3 942,641 - BT0756 0.71 -3.1 942,725 - BT0756 0.77 -2.3 942,985 + -1.5 943,058 + -0.6 943,196 - -0.7 943,257 - BT0757 0.10 +0.2 943,364 + BT0757 0.16 -1.8 943,458 - BT0757 0.20 +1.2 943,476 - BT0757 0.21 +1.3 943,476 - BT0757 0.21 -2.0 943,524 + BT0757 0.23 +0.1 943,575 - BT0757 0.26 +0.5 943,623 - BT0757 0.28 +1.6 943,679 + BT0757 0.31 -0.1 943,680 - BT0757 0.31 +0.9 943,757 + BT0757 0.35 +0.3 943,758 - BT0757 0.35 +2.4 943,760 - BT0757 0.35 +2.3 944,024 - BT0757 0.48 -1.5 944,112 + BT0757 0.52 +2.1 944,184 + BT0757 0.56 -0.8 944,267 + BT0757 0.60 +0.4 944,337 + BT0757 0.63 -2.6 944,378 + BT0757 0.65 +0.7 944,402 + BT0757 0.66 -0.2 944,489 - BT0757 0.71 +1.5 944,508 - BT0757 0.71 -1.2 944,593 + BT0757 0.76 +0.2 944,640 + BT0757 0.78 +0.2 944,651 - BT0757 0.78 +0.4 944,683 - BT0757 0.80 +0.4 944,685 - BT0757 0.80 -1.8 944,701 + BT0757 0.81 +0.0 944,708 + BT0757 0.81 +0.1 944,759 + BT0757 0.84 -3.2 944,960 + +0.4 944,979 + -1.7 945,071 + +0.3 945,088 + -2.4 945,161 + +0.6 945,276 + +2.7 945,330 + +0.3 945,343 - +2.5 945,375 - BT0758 0.10 +1.0 945,589 + BT0758 0.48 -0.4 945,606 - BT0758 0.51 +0.9 945,671 + BT0758 0.62 +3.5 946,023 - +1.5 946,025 + -2.2
Or see this region's nucleotide sequence