Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_660
Experiment: Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nalidixic 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
763,567 | + | +0.2 | |||
763,568 | - | -0.7 | |||
763,616 | - | -1.2 | |||
763,616 | - | -2.0 | |||
763,642 | + | +0.3 | |||
764,006 | - | Pf6N2E2_659 | 0.59 | +0.1 | |
764,006 | - | Pf6N2E2_659 | 0.59 | -0.2 | |
764,074 | - | Pf6N2E2_659 | 0.68 | -0.3 | |
764,246 | - | -0.1 | |||
764,286 | + | -0.2 | |||
764,287 | - | +0.8 | |||
764,287 | - | -0.4 | |||
764,349 | + | -0.3 | |||
764,384 | + | -1.4 | |||
764,385 | - | -0.9 | |||
764,385 | - | -1.0 | |||
764,385 | - | -0.9 | |||
764,385 | - | +0.8 | |||
764,394 | + | -0.3 | |||
764,395 | - | +0.7 | |||
764,510 | + | -1.3 | |||
764,511 | - | +0.6 | |||
764,554 | + | +0.2 | |||
764,555 | - | -0.8 | |||
764,632 | + | Pf6N2E2_660 | 0.36 | +0.1 | |
764,632 | + | Pf6N2E2_660 | 0.36 | -0.4 | |
764,633 | - | Pf6N2E2_660 | 0.37 | -2.0 | |
764,725 | + | Pf6N2E2_660 | 0.72 | -0.7 | |
764,726 | - | Pf6N2E2_660 | 0.72 | -0.2 | |
764,938 | + | -0.3 | |||
765,682 | + | Pf6N2E2_661 | 0.59 | +0.5 | |
765,682 | + | Pf6N2E2_661 | 0.59 | +0.4 | |
765,682 | + | Pf6N2E2_661 | 0.59 | -0.2 | |
765,683 | - | Pf6N2E2_661 | 0.59 | +0.3 | |
765,683 | - | Pf6N2E2_661 | 0.59 | +0.4 | |
765,683 | - | Pf6N2E2_661 | 0.59 | -0.8 | |
765,683 | - | Pf6N2E2_661 | 0.59 | +0.4 |
Or see this region's nucleotide sequence