Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3565

Experiment: Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.008 mg/ml
4,155,418	+		Pf6N2E2_3564	0.19	+0.2
4,155,419	-		Pf6N2E2_3564	0.19	-0.0
4,155,589	-		Pf6N2E2_3564	0.37	+0.4
4,155,589	-		Pf6N2E2_3564	0.37	+0.1
4,155,708	+		Pf6N2E2_3564	0.49	+0.7
4,155,744	+		Pf6N2E2_3564	0.53	+0.9
4,155,744	+		Pf6N2E2_3564	0.53	-0.7
4,155,744	+		Pf6N2E2_3564	0.53	+0.6
4,155,745	-		Pf6N2E2_3564	0.53	+0.2
4,155,825	+		Pf6N2E2_3564	0.62	+0.1
4,155,825	+		Pf6N2E2_3564	0.62	-1.7
4,155,825	+		Pf6N2E2_3564	0.62	-2.2
4,155,826	-		Pf6N2E2_3564	0.62	+0.9
4,155,826	-		Pf6N2E2_3564	0.62	+0.2
4,155,901	-		Pf6N2E2_3564	0.70	+0.5
4,155,916	-		Pf6N2E2_3564	0.71	+0.7
4,155,916	-		Pf6N2E2_3564	0.71	+0.4
4,155,965	+		Pf6N2E2_3564	0.77	-0.5
4,155,965	+		Pf6N2E2_3564	0.77	-0.2
4,156,042	-		Pf6N2E2_3564	0.85	+0.4
4,156,182	+				+0.7
4,156,183	-				+0.5
4,156,183	-				+0.2
4,156,258	+				+1.8
4,156,258	+				+0.9
4,156,267	+				+0.7
4,156,268	-				-0.6
4,156,268	-				-0.8
4,156,268	-				+0.1
4,156,268	-				-0.2
4,156,268	-				+0.0
4,156,327	-		Pf6N2E2_3565	0.16	-0.4
4,156,402	-		Pf6N2E2_3565	0.30	-0.3
4,156,413	+		Pf6N2E2_3565	0.32	+0.9
4,156,413	+		Pf6N2E2_3565	0.32	+0.0
4,156,414	-		Pf6N2E2_3565	0.32	-1.1
4,156,414	-		Pf6N2E2_3565	0.32	+0.1
4,156,414	-		Pf6N2E2_3565	0.32	+0.6
4,156,578	+		Pf6N2E2_3565	0.63	-0.3
4,156,578	+		Pf6N2E2_3565	0.63	-0.4
4,156,578	+		Pf6N2E2_3565	0.63	-1.0
4,156,578	+		Pf6N2E2_3565	0.63	+0.9
4,156,578	+		Pf6N2E2_3565	0.63	-1.6
4,156,578	+		Pf6N2E2_3565	0.63	+2.2
4,156,579	-		Pf6N2E2_3565	0.63	-0.2
4,156,611	+		Pf6N2E2_3565	0.69	+0.2
4,156,611	+		Pf6N2E2_3565	0.69	+0.7
4,156,611	+		Pf6N2E2_3565	0.69	-0.5
4,156,612	-		Pf6N2E2_3565	0.70	+0.9
4,156,612	-		Pf6N2E2_3565	0.70	+0.2
4,156,612	-		Pf6N2E2_3565	0.70	-1.3
4,156,668	+		Pf6N2E2_3565	0.80	-2.4
4,156,668	+		Pf6N2E2_3565	0.80	-0.4
4,156,668	+		Pf6N2E2_3565	0.80	-0.1
4,156,668	+		Pf6N2E2_3565	0.80	+1.2
4,156,668	+		Pf6N2E2_3565	0.80	+0.6
4,156,668	+		Pf6N2E2_3565	0.80	+0.7
4,156,669	-		Pf6N2E2_3565	0.80	-2.0
4,156,773	+				-0.3
4,156,774	-				+0.2
4,156,779	+				-0.0
4,156,779	+				-0.8
4,156,779	+				-0.0
4,156,780	-				+0.1
4,156,785	+				+0.2
4,157,102	+		Pf6N2E2_3566	0.10	+0.0
4,157,103	-		Pf6N2E2_3566	0.11	-1.1
4,157,103	-		Pf6N2E2_3566	0.11	+0.4
4,157,103	-		Pf6N2E2_3566	0.11	-0.0
4,157,103	-		Pf6N2E2_3566	0.11	-0.2
4,157,103	-		Pf6N2E2_3566	0.11	-0.4
4,157,103	-		Pf6N2E2_3566	0.11	+0.0
4,157,103	-		Pf6N2E2_3566	0.11	-0.4
4,157,103	-		Pf6N2E2_3566	0.11	+0.1
4,157,103	-		Pf6N2E2_3566	0.11	+0.1
4,157,201	+		Pf6N2E2_3566	0.15	-0.3
4,157,201	+		Pf6N2E2_3566	0.15	+0.5
4,157,202	-		Pf6N2E2_3566	0.15	+1.2
4,157,202	-		Pf6N2E2_3566	0.15	-0.8
4,157,202	-		Pf6N2E2_3566	0.15	-0.1
4,157,202	-		Pf6N2E2_3566	0.15	+0.5
4,157,202	-		Pf6N2E2_3566	0.15	-0.2
4,157,202	-		Pf6N2E2_3566	0.15	-0.4
4,157,202	-		Pf6N2E2_3566	0.15	-0.3
4,157,327	+		Pf6N2E2_3566	0.21	-2.9
4,157,327	+		Pf6N2E2_3566	0.21	+0.5
4,157,327	+		Pf6N2E2_3566	0.21	+0.6
4,157,327	+		Pf6N2E2_3566	0.21	+0.7
4,157,327	+		Pf6N2E2_3566	0.21	-1.5
4,157,328	-		Pf6N2E2_3566	0.21	-0.9
4,157,328	-		Pf6N2E2_3566	0.21	+0.1
4,157,328	-		Pf6N2E2_3566	0.21	-1.3
4,157,328	-		Pf6N2E2_3566	0.21	-1.4
4,157,670	+		Pf6N2E2_3566	0.38	+0.1
4,157,671	-		Pf6N2E2_3566	0.38	-0.6
4,157,671	-		Pf6N2E2_3566	0.38	+0.4
4,157,671	-		Pf6N2E2_3566	0.38	-2.2
4,157,671	-		Pf6N2E2_3566	0.38	+0.1
4,157,671	-		Pf6N2E2_3566	0.38	-0.1
4,157,671	-		Pf6N2E2_3566	0.38	-0.1
4,157,672	+		Pf6N2E2_3566	0.38	-0.5
4,157,672	+		Pf6N2E2_3566	0.38	+0.1
4,157,672	+		Pf6N2E2_3566	0.38	-0.2
4,157,672	+		Pf6N2E2_3566	0.38	-0.0
4,157,672	+		Pf6N2E2_3566	0.38	-0.1
4,157,672	+		Pf6N2E2_3566	0.38	+0.5
4,157,672	+		Pf6N2E2_3566	0.38	-0.3
4,157,673	-		Pf6N2E2_3566	0.38	+0.7
4,157,673	-		Pf6N2E2_3566	0.38	+0.1
4,157,673	-		Pf6N2E2_3566	0.38	+1.1
4,157,673	-		Pf6N2E2_3566	0.38	-0.9
4,157,673	-		Pf6N2E2_3566	0.38	-1.9
4,157,673	-		Pf6N2E2_3566	0.38	-2.5
4,157,700	+		Pf6N2E2_3566	0.39	+0.2