Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3524

Experiment: Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.008 mg/ml
4,109,063	+				+0.6
4,109,064	-				+0.3
4,109,064	-				+0.0
4,109,064	-				-0.1
4,109,064	-				-0.4
4,109,067	-				+0.2
4,109,126	+				+0.3
4,109,127	-				+0.2
4,109,127	-				+0.1
4,109,127	-				+0.8
4,109,127	-				-0.3
4,109,303	-				+1.2
4,109,303	-				-0.4
4,109,327	-				+0.8
4,109,327	-				+1.2
4,109,342	+		Pf6N2E2_3523	0.11	+0.3
4,109,368	-		Pf6N2E2_3523	0.14	+0.1
4,109,382	-		Pf6N2E2_3523	0.16	-0.3
4,109,461	+		Pf6N2E2_3523	0.27	+0.2
4,109,481	+		Pf6N2E2_3523	0.30	-0.5
4,109,481	+		Pf6N2E2_3523	0.30	-0.9
4,109,481	+		Pf6N2E2_3523	0.30	-0.4
4,109,481	+		Pf6N2E2_3523	0.30	-0.4
4,109,482	-		Pf6N2E2_3523	0.30	+0.3
4,109,482	-		Pf6N2E2_3523	0.30	-0.6
4,109,482	-		Pf6N2E2_3523	0.30	+0.1
4,109,482	-		Pf6N2E2_3523	0.30	+0.6
4,109,482	-		Pf6N2E2_3523	0.30	+0.0
4,109,686	+		Pf6N2E2_3523	0.59	+1.0
4,109,686	+		Pf6N2E2_3523	0.59	+0.3
4,109,687	-		Pf6N2E2_3523	0.59	+0.7
4,109,687	-		Pf6N2E2_3523	0.59	+0.1
4,109,687	-		Pf6N2E2_3523	0.59	+0.2
4,109,697	+		Pf6N2E2_3523	0.60	-1.2
4,109,697	+		Pf6N2E2_3523	0.60	+1.1
4,109,697	+		Pf6N2E2_3523	0.60	-1.2
4,109,697	+		Pf6N2E2_3523	0.60	+0.0
4,109,697	+		Pf6N2E2_3523	0.60	-0.1
4,109,698	-		Pf6N2E2_3523	0.60	+0.1
4,109,698	-		Pf6N2E2_3523	0.60	+0.8
4,109,698	-		Pf6N2E2_3523	0.60	-1.5
4,109,814	+		Pf6N2E2_3523	0.76	-0.5
4,109,823	+		Pf6N2E2_3523	0.78	+0.2
4,109,824	-		Pf6N2E2_3523	0.78	-0.4
4,109,828	+		Pf6N2E2_3523	0.78	+0.7
4,109,829	-		Pf6N2E2_3523	0.78	-1.3
4,109,829	-		Pf6N2E2_3523	0.78	+0.0
4,109,844	+		Pf6N2E2_3523	0.81	+0.3
4,109,956	+				-0.2
4,109,977	+				-1.9
4,110,039	+				-0.3
4,110,059	-				+0.5
4,110,117	-				-0.3
4,110,117	-				-1.3
4,110,163	+		Pf6N2E2_3524	0.14	+0.3
4,110,191	+		Pf6N2E2_3524	0.18	-0.3
4,110,508	+		Pf6N2E2_3524	0.57	-1.2
4,110,509	-		Pf6N2E2_3524	0.57	+1.0
4,110,509	-		Pf6N2E2_3524	0.57	-0.8
4,110,562	+		Pf6N2E2_3524	0.63	-1.3
4,110,599	+		Pf6N2E2_3524	0.68	-0.7
4,110,626	-		Pf6N2E2_3524	0.71	+0.5
4,110,753	-		Pf6N2E2_3524	0.87	-1.4
4,110,753	-		Pf6N2E2_3524	0.87	-1.8
4,110,796	+				+0.3
4,110,796	+				-0.3
4,110,857	+				-1.1
4,110,868	+				-0.9
4,110,907	+				-0.8
4,110,907	+				+0.4
4,110,907	+				+0.1
4,110,953	+				-1.8
4,110,954	-				-0.8
4,110,972	-				-0.6
4,110,983	+				-1.9
4,111,054	-				+0.2
4,111,117	-				-0.9
4,111,137	+				+2.6
4,111,137	+				-0.0
4,111,137	+				-0.7
4,111,137	+				-0.0
4,111,137	+				+0.3
4,111,137	+				-0.2
4,111,138	-				-0.7
4,111,257	+		Pf6N2E2_3525	0.28	+0.5
4,111,257	+		Pf6N2E2_3525	0.28	-0.3
4,111,258	-		Pf6N2E2_3525	0.28	-0.7
4,111,258	-		Pf6N2E2_3525	0.28	-0.4
4,111,375	+		Pf6N2E2_3525	0.47	-0.2
4,111,423	+		Pf6N2E2_3525	0.55	+0.3
4,111,423	+		Pf6N2E2_3525	0.55	+0.8
4,111,424	-		Pf6N2E2_3525	0.56	+0.4
4,111,424	-		Pf6N2E2_3525	0.56	+0.2
4,111,554	+		Pf6N2E2_3525	0.77	+0.6
4,111,554	+		Pf6N2E2_3525	0.77	+0.2
4,111,554	+		Pf6N2E2_3525	0.77	-0.8
4,111,554	+		Pf6N2E2_3525	0.77	+0.3
4,111,555	-		Pf6N2E2_3525	0.78	+0.4
4,111,555	-		Pf6N2E2_3525	0.78	+0.4
4,111,555	-		Pf6N2E2_3525	0.78	+0.0
4,111,555	-		Pf6N2E2_3525	0.78	-1.1
4,111,674	+				-0.6
4,111,675	-				-1.2
4,111,687	-				-0.9
4,111,761	+				+0.9
4,111,761	+				-0.9
4,111,762	-				+0.8
4,111,762	-				+0.1
4,111,771	+				-0.6
4,111,833	-		Pf6N2E2_3526	0.17	-0.6