Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3345

Experiment: Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.008 mg/ml
3,871,421	+		Pf6N2E2_3343	0.69	+1.2
3,871,421	+		Pf6N2E2_3343	0.69	-1.9
3,871,464	-		Pf6N2E2_3343	0.74	+0.2
3,871,464	-		Pf6N2E2_3343	0.74	+0.4
3,871,778	+		Pf6N2E2_3344	0.19	-2.8
3,871,779	-		Pf6N2E2_3344	0.19	+0.3
3,871,843	+		Pf6N2E2_3344	0.30	+0.9
3,871,844	-		Pf6N2E2_3344	0.30	+0.0
3,871,844	-		Pf6N2E2_3344	0.30	-0.1
3,871,844	-		Pf6N2E2_3344	0.30	-0.5
3,871,907	+		Pf6N2E2_3344	0.42	+1.1
3,871,908	-		Pf6N2E2_3344	0.42	+0.5
3,871,908	-		Pf6N2E2_3344	0.42	+1.0
3,872,045	-		Pf6N2E2_3344	0.66	+0.3
3,872,126	+		Pf6N2E2_3344	0.81	+0.7
3,872,234	+				+0.4
3,872,235	-				+0.6
3,872,271	+				+1.3
3,872,272	-				+0.8
3,872,272	-				+0.8
3,872,465	+				+0.7
3,872,465	+				+0.2
3,872,465	+				-1.8
3,872,465	+				-0.7
3,872,466	-				-0.9
3,872,466	-				+0.0
3,872,466	-				-0.9
3,872,830	+		Pf6N2E2_3345	0.24	-0.1
3,872,931	-		Pf6N2E2_3345	0.29	-0.0
3,873,205	+		Pf6N2E2_3345	0.41	+0.4
3,873,236	+		Pf6N2E2_3345	0.42	+0.1
3,873,237	-		Pf6N2E2_3345	0.42	-1.4
3,873,584	+		Pf6N2E2_3345	0.58	-1.1
3,873,584	+		Pf6N2E2_3345	0.58	-2.5
3,873,584	+		Pf6N2E2_3345	0.58	+0.0
3,873,584	+		Pf6N2E2_3345	0.58	-0.1
3,873,584	+		Pf6N2E2_3345	0.58	+0.6
3,873,584	+		Pf6N2E2_3345	0.58	-0.5
3,873,584	+		Pf6N2E2_3345	0.58	-0.1
3,873,584	+		Pf6N2E2_3345	0.58	-0.9
3,873,584	+		Pf6N2E2_3345	0.58	-0.6
3,873,584	+		Pf6N2E2_3345	0.58	-1.0
3,873,584	+		Pf6N2E2_3345	0.58	-0.1
3,873,584	+		Pf6N2E2_3345	0.58	+0.1
3,873,584	+		Pf6N2E2_3345	0.58	-0.4
3,873,585	-		Pf6N2E2_3345	0.58	-2.4
3,873,585	-		Pf6N2E2_3345	0.58	-0.6
3,873,585	-		Pf6N2E2_3345	0.58	+0.6
3,873,585	-		Pf6N2E2_3345	0.58	-0.9
3,873,585	-		Pf6N2E2_3345	0.58	+1.4
3,873,585	-		Pf6N2E2_3345	0.58	+0.4
3,873,585	-		Pf6N2E2_3345	0.58	-1.5
3,873,585	-		Pf6N2E2_3345	0.58	-0.0
3,873,592	+		Pf6N2E2_3345	0.58	-0.1
3,873,593	-		Pf6N2E2_3345	0.58	-0.5
3,873,593	-		Pf6N2E2_3345	0.58	-1.0
3,873,760	+		Pf6N2E2_3345	0.66	+0.9
3,873,760	+		Pf6N2E2_3345	0.66	-0.8
3,873,761	-		Pf6N2E2_3345	0.66	+0.7
3,873,761	-		Pf6N2E2_3345	0.66	+0.7
3,873,875	+		Pf6N2E2_3345	0.71	+0.8
3,873,875	+		Pf6N2E2_3345	0.71	-0.2
3,873,875	+		Pf6N2E2_3345	0.71	-0.7
3,873,875	+		Pf6N2E2_3345	0.71	-0.5
3,873,875	+		Pf6N2E2_3345	0.71	-1.4
3,873,875	+		Pf6N2E2_3345	0.71	-0.1
3,873,875	+		Pf6N2E2_3345	0.71	-1.1
3,873,876	-		Pf6N2E2_3345	0.71	-0.4
3,873,876	-		Pf6N2E2_3345	0.71	-0.2
3,873,876	-		Pf6N2E2_3345	0.71	+0.3
3,873,876	-		Pf6N2E2_3345	0.71	-0.9
3,873,876	-		Pf6N2E2_3345	0.71	-0.6
3,873,876	-		Pf6N2E2_3345	0.71	+0.7
3,873,902	+		Pf6N2E2_3345	0.72	-1.0
3,873,902	+		Pf6N2E2_3345	0.72	+0.7
3,873,903	-		Pf6N2E2_3345	0.72	-0.4
3,873,903	-		Pf6N2E2_3345	0.72	-0.7
3,873,903	-		Pf6N2E2_3345	0.72	-0.4
3,873,952	+		Pf6N2E2_3345	0.75	+0.5
3,873,952	+		Pf6N2E2_3345	0.75	+0.0
3,873,952	+		Pf6N2E2_3345	0.75	-0.2
3,873,952	+		Pf6N2E2_3345	0.75	-0.1
3,873,953	-		Pf6N2E2_3345	0.75	-1.0
3,874,150	+		Pf6N2E2_3345	0.84	-0.1
3,874,150	+		Pf6N2E2_3345	0.84	-0.2
3,874,150	+		Pf6N2E2_3345	0.84	+1.1
3,874,151	-		Pf6N2E2_3345	0.84	+0.4
3,874,151	-		Pf6N2E2_3345	0.84	-1.6
3,874,263	+		Pf6N2E2_3345	0.89	-0.8
3,874,263	+		Pf6N2E2_3345	0.89	+0.2
3,874,264	-		Pf6N2E2_3345	0.89	-0.8
3,874,264	-		Pf6N2E2_3345	0.89	-0.4
3,874,264	-		Pf6N2E2_3345	0.89	-0.5
3,874,298	+				+0.4
3,874,492	+				-0.1
3,874,492	+				+0.5
3,874,492	+				-0.4
3,874,492	+				+0.2
3,874,492	+				-0.2
3,874,492	+				+0.5
3,874,493	-				+0.3
3,874,493	-				+0.3
3,874,493	-				+0.6
3,874,493	-				+0.1
3,874,493	-				+0.2
3,874,493	-				+0.1
3,874,493	-				-0.8
3,874,557	+				-0.2
3,874,557	+				+0.4
3,874,557	+				-0.1
3,874,557	+				+0.4
3,874,558	-				-0.4
3,874,558	-				+0.1
3,874,605	-				+0.2
3,874,644	+				-0.3
3,874,644	+				+0.5
3,874,645	-				+0.8
3,874,645	-				+0.3
3,874,661	-				+1.1
3,874,706	+				-0.6
3,874,706	+				+0.8
3,874,706	+				+0.4
3,874,706	+				-0.9
3,874,706	+				+0.1
3,874,706	+				-1.5
3,874,706	+				-1.2
3,874,706	+				-0.7
3,874,707	-				-0.7
3,874,707	-				+0.7
3,874,707	-				+0.4
3,874,707	-				+1.2
3,874,707	-				+0.7
3,874,707	-				+0.1
3,874,708	+				+0.3
3,874,709	-				+1.0
3,874,749	+				+1.7
3,874,749	+				+0.5
3,874,954	-		Pf6N2E2_3346	0.25	+1.2
3,875,183	+		Pf6N2E2_3346	0.52	+0.6
3,875,183	+		Pf6N2E2_3346	0.52	-1.9
3,875,183	+		Pf6N2E2_3346	0.52	+0.8
3,875,184	-		Pf6N2E2_3346	0.52	+1.3
3,875,184	-		Pf6N2E2_3346	0.52	+0.9
3,875,184	-		Pf6N2E2_3346	0.52	+0.6
3,875,184	-		Pf6N2E2_3346	0.52	-0.8
3,875,184	-		Pf6N2E2_3346	0.52	-0.1
3,875,228	+		Pf6N2E2_3346	0.58	-1.2
3,875,229	-		Pf6N2E2_3346	0.58	-0.0
3,875,229	-		Pf6N2E2_3346	0.58	+0.2