Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3130

Experiment: Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.008 mg/ml
3,620,760	+				-0.3
3,620,761	-				-0.5
3,620,761	-				-0.6
3,620,761	-				+0.6
3,620,808	+		Pf6N2E2_3129	0.14	+0.2
3,620,809	-		Pf6N2E2_3129	0.14	-1.1
3,620,847	+		Pf6N2E2_3129	0.18	-0.7
3,620,848	-		Pf6N2E2_3129	0.18	-1.2
3,621,006	+		Pf6N2E2_3129	0.35	+0.3
3,621,006	+		Pf6N2E2_3129	0.35	-0.5
3,621,006	+		Pf6N2E2_3129	0.35	+0.2
3,621,007	-		Pf6N2E2_3129	0.35	+0.3
3,621,007	-		Pf6N2E2_3129	0.35	-0.2
3,621,009	+		Pf6N2E2_3129	0.35	-0.1
3,621,009	+		Pf6N2E2_3129	0.35	-0.8
3,621,009	+		Pf6N2E2_3129	0.35	+0.8
3,621,009	+		Pf6N2E2_3129	0.35	+1.0
3,621,009	+		Pf6N2E2_3129	0.35	+0.0
3,621,009	+		Pf6N2E2_3129	0.35	+0.5
3,621,009	+		Pf6N2E2_3129	0.35	+0.8
3,621,009	+		Pf6N2E2_3129	0.35	-0.3
3,621,009	+		Pf6N2E2_3129	0.35	-0.6
3,621,010	-		Pf6N2E2_3129	0.36	-0.8
3,621,010	-		Pf6N2E2_3129	0.36	+0.8
3,621,010	-		Pf6N2E2_3129	0.36	+1.0
3,621,010	-		Pf6N2E2_3129	0.36	+0.5
3,621,010	-		Pf6N2E2_3129	0.36	-0.3
3,621,010	-		Pf6N2E2_3129	0.36	-0.5
3,621,010	-		Pf6N2E2_3129	0.36	-0.6
3,621,010	-		Pf6N2E2_3129	0.36	+0.5
3,621,010	-		Pf6N2E2_3129	0.36	-1.5
3,621,010	-		Pf6N2E2_3129	0.36	+0.4
3,621,022	-		Pf6N2E2_3129	0.37	+0.6
3,621,051	+		Pf6N2E2_3129	0.40	-0.1
3,621,051	+		Pf6N2E2_3129	0.40	+0.2
3,621,052	-		Pf6N2E2_3129	0.40	-0.1
3,621,084	+		Pf6N2E2_3129	0.43	-0.3
3,621,084	+		Pf6N2E2_3129	0.43	-1.7
3,621,085	-		Pf6N2E2_3129	0.43	-0.9
3,621,085	-		Pf6N2E2_3129	0.43	-0.7
3,621,085	-		Pf6N2E2_3129	0.43	-0.9
3,621,085	-		Pf6N2E2_3129	0.43	+0.5
3,621,099	+		Pf6N2E2_3129	0.45	+0.1
3,621,100	-		Pf6N2E2_3129	0.45	+0.6
3,621,100	-		Pf6N2E2_3129	0.45	+0.9
3,621,100	-		Pf6N2E2_3129	0.45	-0.6
3,621,100	-		Pf6N2E2_3129	0.45	-0.5
3,621,255	+		Pf6N2E2_3129	0.61	+0.7
3,621,256	-		Pf6N2E2_3129	0.61	+0.1
3,621,256	-		Pf6N2E2_3129	0.61	-0.5
3,621,477	+		Pf6N2E2_3129	0.85	+2.2
3,621,477	+		Pf6N2E2_3129	0.85	-1.1
3,621,478	-		Pf6N2E2_3129	0.85	-1.3
3,621,478	-		Pf6N2E2_3129	0.85	+0.0
3,621,499	-		Pf6N2E2_3129	0.87	-0.6
3,621,576	+				+0.2
3,621,576	+				-0.8
3,621,576	+				-0.2
3,621,576	+				-0.5
3,621,576	+				+0.8
3,621,577	-				-0.5
3,621,577	-				+0.5
3,621,577	-				+0.6
3,621,580	+				+1.4
3,621,580	+				+0.5
3,621,580	+				+0.1
3,621,581	-				+0.5
3,621,581	-				+0.9
3,621,709	+				-0.4
3,621,919	-		Pf6N2E2_3130	0.35	-1.7
3,622,063	+		Pf6N2E2_3130	0.53	-0.6
3,622,157	-		Pf6N2E2_3130	0.65	-0.4
3,622,349	+		Pf6N2E2_3130	0.90	-0.8
3,622,349	+		Pf6N2E2_3130	0.90	-0.1
3,622,350	-				-0.6
3,622,378	+				-0.7
3,622,378	+				+0.6
3,622,379	-				-1.4
3,622,379	-				+0.2
3,622,381	+				+1.2
3,622,381	+				-0.5
3,622,381	+				-0.7
3,622,426	+				-0.2
3,622,426	+				+0.3
3,622,426	+				+1.1
3,622,427	-				+0.2
3,622,427	-				+0.1
3,622,876	+		Pf6N2E2_3131	0.26	+0.6
3,622,948	+		Pf6N2E2_3131	0.31	-2.0
3,622,948	+		Pf6N2E2_3131	0.31	+0.4
3,622,949	-		Pf6N2E2_3131	0.31	-0.9
3,623,001	+		Pf6N2E2_3131	0.35	-0.5
3,623,087	+		Pf6N2E2_3131	0.41	+0.6
3,623,088	-		Pf6N2E2_3131	0.41	+0.3
3,623,088	-		Pf6N2E2_3131	0.41	+0.2
3,623,320	+		Pf6N2E2_3131	0.57	+1.0
3,623,321	-		Pf6N2E2_3131	0.58	-0.2
3,623,359	+		Pf6N2E2_3131	0.60	-0.6
3,623,360	-		Pf6N2E2_3131	0.60	+0.9
3,623,360	-		Pf6N2E2_3131	0.60	-0.0
3,623,360	-		Pf6N2E2_3131	0.60	+0.7
3,623,377	+		Pf6N2E2_3131	0.61	+0.7
3,623,377	+		Pf6N2E2_3131	0.61	-0.0
3,623,378	-		Pf6N2E2_3131	0.62	+0.7
3,623,378	-		Pf6N2E2_3131	0.62	+0.7
3,623,425	+		Pf6N2E2_3131	0.65	+0.3
3,623,425	+		Pf6N2E2_3131	0.65	-0.5
3,623,425	+		Pf6N2E2_3131	0.65	-0.7
3,623,426	-		Pf6N2E2_3131	0.65	+0.2