Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3035

Experiment: Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.008 mg/ml
3,517,173	-				+0.0
3,517,173	-				+0.2
3,517,173	-				-0.1
3,517,173	-				+0.3
3,517,243	-				+0.6
3,517,281	-				-0.2
3,517,284	-				+0.1
3,517,284	-				-0.0
3,517,284	-				-0.3
3,517,320	+				-0.8
3,517,320	+				-0.2
3,517,320	+				-1.0
3,517,324	+				+0.0
3,517,324	+				-0.4
3,517,324	+				-0.7
3,517,324	+				-0.4
3,517,324	+				+0.7
3,517,324	+				-0.1
3,517,481	+				-0.0
3,517,586	-		Pf6N2E2_3033	0.62	+1.3
3,517,586	-		Pf6N2E2_3033	0.62	+0.7
3,517,636	+				-0.9
3,517,683	+				+0.1
3,517,684	-				+1.1
3,517,842	+				+0.6
3,517,842	+				+0.7
3,517,843	-				+0.3
3,517,843	-				+0.6
3,517,843	-				+0.3
3,517,843	-				+0.7
3,517,843	-				+0.8
3,517,932	-				-0.1
3,517,932	-				+0.6
3,517,992	+		Pf6N2E2_3034	0.20	+0.4
3,517,992	+		Pf6N2E2_3034	0.20	+0.0
3,517,992	+		Pf6N2E2_3034	0.20	+0.5
3,517,992	+		Pf6N2E2_3034	0.20	-0.8
3,517,992	+		Pf6N2E2_3034	0.20	+0.3
3,517,992	+		Pf6N2E2_3034	0.20	+0.0
3,517,993	-		Pf6N2E2_3034	0.21	-1.3
3,517,993	-		Pf6N2E2_3034	0.21	+0.6
3,517,993	-		Pf6N2E2_3034	0.21	+0.0
3,517,993	-		Pf6N2E2_3034	0.21	+0.2
3,517,993	-		Pf6N2E2_3034	0.21	+0.5
3,517,996	+		Pf6N2E2_3034	0.22	-2.0
3,517,996	+		Pf6N2E2_3034	0.22	+0.8
3,517,997	-		Pf6N2E2_3034	0.23	+0.3
3,517,997	-		Pf6N2E2_3034	0.23	+0.1
3,518,018	+		Pf6N2E2_3034	0.37	+0.2
3,518,116	+				-0.3
3,518,116	+				-0.3
3,518,116	+				-0.2
3,518,150	-				-0.2
3,518,195	+				+0.8
3,518,196	-				-1.2
3,518,196	-				+0.4
3,518,256	-				+0.0
3,518,256	-				+0.7
3,518,256	-				+0.6
3,518,267	+				+1.0
3,518,268	-				+1.3
3,518,268	-				+0.0
3,518,363	+				+0.1
3,518,364	-				-1.6
3,518,382	-				+0.1
3,518,498	-		Pf6N2E2_3035	0.14	+0.2
3,518,874	-		Pf6N2E2_3035	0.28	+1.3
3,519,130	+		Pf6N2E2_3035	0.38	+0.4
3,519,130	+		Pf6N2E2_3035	0.38	+0.9
3,519,131	-		Pf6N2E2_3035	0.38	-0.7
3,519,131	-		Pf6N2E2_3035	0.38	+0.7
3,519,131	-		Pf6N2E2_3035	0.38	-0.2
3,519,351	-		Pf6N2E2_3035	0.47	-0.1
3,519,459	+		Pf6N2E2_3035	0.51	+2.2
3,519,459	+		Pf6N2E2_3035	0.51	+0.0
3,519,459	+		Pf6N2E2_3035	0.51	-0.1
3,519,460	-		Pf6N2E2_3035	0.51	-0.0
3,519,460	-		Pf6N2E2_3035	0.51	+0.4
3,519,460	-		Pf6N2E2_3035	0.51	+0.3
3,519,551	+		Pf6N2E2_3035	0.55	+1.3
3,519,551	+		Pf6N2E2_3035	0.55	-1.3
3,519,552	-		Pf6N2E2_3035	0.55	-0.0
3,519,569	+		Pf6N2E2_3035	0.55	+0.5
3,519,569	+		Pf6N2E2_3035	0.55	+0.3
3,519,617	+		Pf6N2E2_3035	0.57	+0.2
3,519,617	+		Pf6N2E2_3035	0.57	+1.1
3,519,617	+		Pf6N2E2_3035	0.57	+0.2
3,519,617	+		Pf6N2E2_3035	0.57	+1.2
3,519,617	+		Pf6N2E2_3035	0.57	-1.2
3,519,618	-		Pf6N2E2_3035	0.57	+1.4
3,519,618	-		Pf6N2E2_3035	0.57	+1.3
3,519,734	+		Pf6N2E2_3035	0.62	+0.2
3,519,734	+		Pf6N2E2_3035	0.62	+0.6
3,519,735	-		Pf6N2E2_3035	0.62	-0.2
3,519,735	-		Pf6N2E2_3035	0.62	-1.0
3,519,735	-		Pf6N2E2_3035	0.62	+1.0
3,519,735	-		Pf6N2E2_3035	0.62	+1.8
3,519,924	+		Pf6N2E2_3035	0.69	-0.0
3,519,924	+		Pf6N2E2_3035	0.69	+0.9
3,519,924	+		Pf6N2E2_3035	0.69	-0.6
3,519,925	-		Pf6N2E2_3035	0.69	+0.9
3,520,009	+		Pf6N2E2_3035	0.72	+1.0
3,520,010	-		Pf6N2E2_3035	0.72	+0.7
3,520,020	-		Pf6N2E2_3035	0.73	-0.4
3,520,020	-		Pf6N2E2_3035	0.73	+0.8
3,520,064	-		Pf6N2E2_3035	0.74	-0.1
3,520,064	-		Pf6N2E2_3035	0.74	+0.4
3,520,092	+		Pf6N2E2_3035	0.76	+0.2
3,520,253	-		Pf6N2E2_3035	0.82	+0.1
3,520,314	-		Pf6N2E2_3035	0.84	-0.4
3,520,314	-		Pf6N2E2_3035	0.84	+0.5
3,520,334	+		Pf6N2E2_3035	0.85	-0.9
3,520,695	+				+0.6
3,520,700	+				+0.6
3,520,702	+				-0.0
3,520,702	+				+0.0
3,520,702	+				+0.3
3,520,702	+				+1.0
3,520,702	+				+1.1
3,520,702	+				-1.1
3,520,702	+				+1.1
3,520,702	+				+0.1
3,520,702	+				+2.0
3,520,702	+				+0.0
3,520,703	-				+1.1
3,520,703	-				+1.4
3,520,721	+				-0.9
3,520,721	+				+1.7
3,520,721	+				+0.4
3,520,721	+				-0.7
3,520,721	+				+0.4
3,520,721	+				+0.9
3,520,721	+				-1.2
3,520,721	+				+0.2
3,520,721	+				-0.9
3,520,721	+				+1.4
3,520,722	-				+1.5
3,520,722	-				-1.6
3,520,726	+				+0.8
3,520,726	+				-0.7
3,520,726	+				+0.5
3,520,726	+				+0.4
3,520,776	+				+0.6
3,520,779	+				+0.6
3,520,779	+				-0.4
3,520,779	+				+0.2
3,521,399	+				+0.3
3,521,400	-				-1.6
3,521,400	-				+0.3
3,521,400	-				-0.1
3,521,402	+				+0.2
3,521,402	+				+0.4
3,521,402	+				-0.5
3,521,403	-				-0.4
3,521,403	-				-0.2
3,521,405	+				-0.4
3,521,405	+				+0.3
3,521,436	-				+1.5
3,521,436	-				-1.4
3,521,493	+				+0.3
3,521,517	+				+0.8
3,521,517	+				+0.8
3,521,518	-				-0.6
3,521,518	-				+0.7
3,521,518	-				+0.3
3,521,518	-				+1.1
3,521,519	+				-0.2
3,521,555	-				-2.7
3,521,564	+				-0.3
3,521,576	+				-2.5
3,521,576	+				-1.1
3,521,576	+				-0.4
3,521,577	-				-1.3
3,521,577	-				+0.8
3,521,577	-				+0.4
3,521,589	+				-0.4
3,521,590	-				+0.0
3,521,596	-				+0.8
3,521,596	-				+0.9