Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3002

Experiment: Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.008 mg/ml
3,490,976	-		Pf6N2E2_3000	0.65	-0.2
3,490,976	-		Pf6N2E2_3000	0.65	+0.2
3,491,000	+		Pf6N2E2_3000	0.68	+0.4
3,491,001	-		Pf6N2E2_3000	0.68	-0.6
3,491,001	-		Pf6N2E2_3000	0.68	+0.5
3,491,001	-		Pf6N2E2_3000	0.68	+0.8
3,491,001	-		Pf6N2E2_3000	0.68	+1.0
3,491,001	-		Pf6N2E2_3000	0.68	-1.2
3,491,001	-		Pf6N2E2_3000	0.68	-1.2
3,491,001	-		Pf6N2E2_3000	0.68	-0.3
3,491,025	+		Pf6N2E2_3000	0.70	+0.8
3,491,025	+		Pf6N2E2_3000	0.70	+0.7
3,491,025	+		Pf6N2E2_3000	0.70	-0.0
3,491,025	+		Pf6N2E2_3000	0.70	+1.0
3,491,026	-		Pf6N2E2_3000	0.70	+0.2
3,491,026	-		Pf6N2E2_3000	0.70	+0.1
3,491,026	-		Pf6N2E2_3000	0.70	-0.1
3,491,026	-		Pf6N2E2_3000	0.70	+0.4
3,491,026	-		Pf6N2E2_3000	0.70	+0.4
3,491,026	-		Pf6N2E2_3000	0.70	+0.5
3,491,384	-				-0.1
3,491,397	-				-0.5
3,491,397	-				-0.1
3,491,397	-				-1.8
3,491,397	-				+0.4
3,491,397	-				+0.1
3,491,397	-				+0.8
3,491,416	-				+0.2
3,491,666	+		Pf6N2E2_3001	0.46	+0.7
3,491,666	+		Pf6N2E2_3001	0.46	+1.0
3,491,666	+		Pf6N2E2_3001	0.46	+0.3
3,491,667	-		Pf6N2E2_3001	0.46	-0.3
3,491,667	-		Pf6N2E2_3001	0.46	-2.0
3,491,669	+		Pf6N2E2_3001	0.47	-0.3
3,491,669	+		Pf6N2E2_3001	0.47	+1.4
3,491,669	+		Pf6N2E2_3001	0.47	+0.1
3,491,669	+		Pf6N2E2_3001	0.47	+0.7
3,491,669	+		Pf6N2E2_3001	0.47	+0.5
3,491,669	+		Pf6N2E2_3001	0.47	+0.4
3,491,670	-		Pf6N2E2_3001	0.47	+1.2
3,491,670	-		Pf6N2E2_3001	0.47	-0.6
3,491,732	+		Pf6N2E2_3001	0.57	+0.6
3,491,732	+		Pf6N2E2_3001	0.57	+0.0
3,491,733	-		Pf6N2E2_3001	0.57	+0.2
3,491,804	-		Pf6N2E2_3001	0.69	-0.2
3,491,804	-		Pf6N2E2_3001	0.69	+1.2
3,491,804	-		Pf6N2E2_3001	0.69	+0.4
3,491,961	-				+1.1
3,491,961	-				-0.5
3,491,977	+				-0.2
3,491,978	-				-0.1
3,491,978	-				+0.2
3,492,280	+		Pf6N2E2_3002	0.29	-0.6
3,492,281	-		Pf6N2E2_3002	0.29	+0.6
3,492,281	-		Pf6N2E2_3002	0.29	+0.2
3,492,373	+		Pf6N2E2_3002	0.38	+0.2
3,492,430	+		Pf6N2E2_3002	0.44	-1.2
3,492,431	-		Pf6N2E2_3002	0.44	-1.5
3,492,552	-		Pf6N2E2_3002	0.55	+1.1
3,492,552	-		Pf6N2E2_3002	0.55	+0.3
3,492,666	-		Pf6N2E2_3002	0.66	+0.6
3,492,886	+		Pf6N2E2_3002	0.87	+1.0
3,492,886	+		Pf6N2E2_3002	0.87	+1.2
3,492,886	+		Pf6N2E2_3002	0.87	+0.7
3,492,886	+		Pf6N2E2_3002	0.87	+0.6
3,492,886	+		Pf6N2E2_3002	0.87	+1.2
3,492,886	+		Pf6N2E2_3002	0.87	+1.6
3,492,886	+		Pf6N2E2_3002	0.87	-0.3
3,492,887	-		Pf6N2E2_3002	0.88	-0.8
3,492,887	-		Pf6N2E2_3002	0.88	+0.3
3,492,887	-		Pf6N2E2_3002	0.88	+0.3
3,492,887	-		Pf6N2E2_3002	0.88	+0.8
3,492,887	-		Pf6N2E2_3002	0.88	-0.2
3,493,016	+				+0.6
3,493,016	+				+0.6
3,493,017	-				-0.1
3,493,017	-				-0.1
3,493,017	-				+0.4
3,493,032	+				-0.4
3,493,032	+				+0.6
3,493,032	+				+0.1
3,493,032	+				-0.4
3,493,032	+				+0.2
3,493,032	+				-0.2
3,493,032	+				+1.2
3,493,033	-				-1.5
3,493,033	-				-1.4
3,493,033	-				-0.0
3,493,033	-				+0.7
3,493,033	-				+1.1
3,493,033	-				-0.1
3,493,033	-				-0.5
3,493,182	-		Pf6N2E2_3003	0.44	-0.6
3,493,182	-		Pf6N2E2_3003	0.44	+0.6
3,493,182	-		Pf6N2E2_3003	0.44	-0.8
3,493,449	+				-0.5
3,493,449	+				-0.2
3,493,450	-				-0.0
3,493,642	+		Pf6N2E2_3004	0.47	-0.1
3,493,642	+		Pf6N2E2_3004	0.47	-0.4
3,493,642	+		Pf6N2E2_3004	0.47	+0.2
3,493,905	+				+0.1
3,493,905	+				+0.5
3,493,967	+				+1.2
3,493,967	+				-0.4