Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2821

Experiment: Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.008 mg/ml
3,306,901	+		Pf6N2E2_2820	0.31	+0.8
3,306,902	-		Pf6N2E2_2820	0.31	-0.1
3,306,983	-		Pf6N2E2_2820	0.39	+1.1
3,307,043	+		Pf6N2E2_2820	0.45	-0.2
3,307,043	+		Pf6N2E2_2820	0.45	-1.2
3,307,044	-		Pf6N2E2_2820	0.45	-0.2
3,307,309	+		Pf6N2E2_2820	0.70	+0.7
3,307,309	+		Pf6N2E2_2820	0.70	-0.9
3,307,309	+		Pf6N2E2_2820	0.70	-0.3
3,307,310	-		Pf6N2E2_2820	0.70	-0.4
3,307,310	-		Pf6N2E2_2820	0.70	-0.1
3,307,310	-		Pf6N2E2_2820	0.70	-0.6
3,307,310	-		Pf6N2E2_2820	0.70	+1.1
3,307,348	-		Pf6N2E2_2820	0.74	+0.6
3,307,417	+		Pf6N2E2_2820	0.80	-1.0
3,307,418	-		Pf6N2E2_2820	0.80	+0.8
3,307,418	-		Pf6N2E2_2820	0.80	-0.5
3,307,418	-		Pf6N2E2_2820	0.80	+1.0
3,307,418	-		Pf6N2E2_2820	0.80	+0.7
3,307,600	+				-0.2
3,307,600	+				+0.6
3,307,601	-				+1.3
3,307,609	+				-0.7
3,307,629	+				-1.5
3,307,630	-				-0.6
3,307,678	-				-0.0
3,307,731	+				+1.7
3,307,732	-				+0.1
3,307,732	-				+0.4
3,307,732	-				+0.0
3,307,734	+				+1.1
3,307,776	+				+2.3
3,307,906	+		Pf6N2E2_2821	0.16	+0.3
3,307,906	+		Pf6N2E2_2821	0.16	+1.3
3,307,907	-		Pf6N2E2_2821	0.16	-0.6
3,308,048	+		Pf6N2E2_2821	0.38	+1.9
3,308,049	-		Pf6N2E2_2821	0.39	-0.1
3,308,049	-		Pf6N2E2_2821	0.39	+1.1
3,308,174	+		Pf6N2E2_2821	0.59	+2.9
3,308,174	+		Pf6N2E2_2821	0.59	+2.8
3,308,174	+		Pf6N2E2_2821	0.59	+1.5
3,308,174	+		Pf6N2E2_2821	0.59	+2.5
3,308,174	+		Pf6N2E2_2821	0.59	+2.9
3,308,175	-		Pf6N2E2_2821	0.59	-2.2
3,308,176	+		Pf6N2E2_2821	0.59	+3.0
3,308,177	-		Pf6N2E2_2821	0.59	-0.3
3,308,212	+		Pf6N2E2_2821	0.65	+0.5
3,308,213	-		Pf6N2E2_2821	0.65	+0.3
3,308,213	-		Pf6N2E2_2821	0.65	+0.1
3,308,213	-		Pf6N2E2_2821	0.65	+0.2
3,308,213	-		Pf6N2E2_2821	0.65	-1.3
3,308,213	-		Pf6N2E2_2821	0.65	-0.5
3,308,281	-		Pf6N2E2_2821	0.76	+0.6
3,308,401	+				+3.7
3,308,402	-				-2.3
3,308,512	-				+2.7
3,308,512	-				-2.0
3,308,512	-				-0.7
3,308,528	-				+0.2
3,308,528	-				-1.0
3,308,550	+				+2.1
3,308,575	+				+2.5
3,308,576	-				-1.0
3,308,607	-				-0.7
3,308,666	-				+5.5
3,308,666	-				+5.5
3,308,739	+		Pf6N2E2_2822	0.17	+5.0
3,308,739	+		Pf6N2E2_2822	0.17	+5.6
3,308,739	+		Pf6N2E2_2822	0.17	+5.6
3,308,740	-		Pf6N2E2_2822	0.17	+5.6
3,308,920	+		Pf6N2E2_2822	0.45	+5.9
3,308,920	+		Pf6N2E2_2822	0.45	+6.7
3,308,920	+		Pf6N2E2_2822	0.45	+5.9
3,308,920	+		Pf6N2E2_2822	0.45	+6.6
3,308,920	+		Pf6N2E2_2822	0.45	+4.1
3,308,920	+		Pf6N2E2_2822	0.45	+5.7
3,308,921	-		Pf6N2E2_2822	0.45	+5.4
3,308,921	-		Pf6N2E2_2822	0.45	+5.5
3,308,921	-		Pf6N2E2_2822	0.45	+5.6
3,308,921	-		Pf6N2E2_2822	0.45	+5.7
3,308,939	-		Pf6N2E2_2822	0.48	+5.0
3,309,002	-		Pf6N2E2_2822	0.58	+5.8
3,309,002	-		Pf6N2E2_2822	0.58	+4.7
3,309,120	+		Pf6N2E2_2822	0.77	+6.1
3,309,120	+		Pf6N2E2_2822	0.77	+5.7
3,309,120	+		Pf6N2E2_2822	0.77	+6.2
3,309,120	+		Pf6N2E2_2822	0.77	+6.2
3,309,121	-		Pf6N2E2_2822	0.77	+4.7
3,309,121	-		Pf6N2E2_2822	0.77	+5.4
3,309,271	+				+7.0
3,309,271	+				+6.4
3,309,272	-				+0.8
3,309,304	+				+5.8
3,309,305	-				-2.7
3,309,305	-				-4.0
3,309,315	+				+6.0
3,309,315	+				+6.3
3,309,315	+				+6.3
3,309,315	+				+5.7
3,309,315	+				+6.7
3,309,379	+				+7.1
3,309,379	+				+6.1
3,309,379	+				+6.7
3,309,383	+				+5.8
3,309,383	+				+6.1
3,309,384	-				-3.8
3,309,423	+				+5.0
3,309,427	+				+5.5
3,309,433	+				+5.4