Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2712

Experiment: Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.008 mg/ml
3,203,968	+		Pf6N2E2_2710	0.85	-0.1
3,204,033	+				+0.4
3,204,033	+				+0.1
3,204,033	+				+0.9
3,204,033	+				-3.0
3,204,034	-				-0.6
3,204,034	-				+0.7
3,204,034	-				+1.0
3,204,034	-				+0.9
3,204,034	-				+0.4
3,204,034	-				-0.5
3,204,034	-				-0.2
3,204,037	+				-0.0
3,204,037	+				+0.3
3,204,037	+				+0.3
3,204,037	+				+1.9
3,204,038	-				-0.5
3,204,038	-				+0.5
3,204,038	-				+0.0
3,204,038	-				-0.1
3,204,038	-				+0.5
3,204,050	+				-0.2
3,204,051	-				-1.0
3,204,051	-				+0.4
3,204,051	-				-0.6
3,204,051	-				+1.2
3,204,216	+		Pf6N2E2_2711	0.20	+0.5
3,204,217	-		Pf6N2E2_2711	0.20	-0.3
3,204,217	-		Pf6N2E2_2711	0.20	-0.9
3,204,217	-		Pf6N2E2_2711	0.20	-0.0
3,204,292	+		Pf6N2E2_2711	0.29	+0.4
3,204,379	-		Pf6N2E2_2711	0.41	+0.3
3,204,569	+		Pf6N2E2_2711	0.65	-0.2
3,204,570	-		Pf6N2E2_2711	0.65	-1.1
3,204,609	-		Pf6N2E2_2711	0.70	-0.6
3,204,609	-		Pf6N2E2_2711	0.70	-0.6
3,204,609	-		Pf6N2E2_2711	0.70	+1.1
3,204,718	+		Pf6N2E2_2711	0.84	+0.4
3,204,718	+		Pf6N2E2_2711	0.84	-0.2
3,204,718	+		Pf6N2E2_2711	0.84	+0.3
3,204,718	+		Pf6N2E2_2711	0.84	+0.3
3,204,719	-		Pf6N2E2_2711	0.84	-0.1
3,204,829	-				-0.8
3,205,072	-		Pf6N2E2_2712	0.40	-1.3
3,205,095	+		Pf6N2E2_2712	0.45	+0.0
3,205,095	+		Pf6N2E2_2712	0.45	+0.0
3,205,095	+		Pf6N2E2_2712	0.45	+0.3
3,205,096	-		Pf6N2E2_2712	0.45	-0.3
3,205,096	-		Pf6N2E2_2712	0.45	-1.4
3,205,096	-		Pf6N2E2_2712	0.45	-0.4
3,205,096	-		Pf6N2E2_2712	0.45	-0.7
3,205,166	-		Pf6N2E2_2712	0.59	-0.9
3,205,202	+		Pf6N2E2_2712	0.66	+1.0
3,205,203	-		Pf6N2E2_2712	0.66	-1.8
3,205,203	-		Pf6N2E2_2712	0.66	-1.0
3,205,203	-		Pf6N2E2_2712	0.66	-0.4
3,205,210	+		Pf6N2E2_2712	0.68	-0.7
3,205,293	-		Pf6N2E2_2712	0.85	-1.0
3,205,293	-		Pf6N2E2_2712	0.85	-1.0
3,205,324	-				-1.6
3,205,344	+				-0.3
3,205,344	+				-2.5
3,205,344	+				-0.8
3,205,345	-				-1.9
3,205,393	+				-0.1
3,205,393	+				-0.1
3,205,393	+				-0.5
3,205,393	+				+0.5
3,205,393	+				+0.3
3,205,393	+				-0.5
3,205,394	-				+0.7
3,205,394	-				-1.1
3,205,394	-				+0.2
3,205,394	-				+1.6
3,205,394	-				+0.3
3,205,395	+				+0.2
3,205,395	+				-0.3
3,205,395	+				-0.4
3,205,395	+				-0.2
3,205,396	-				+0.4
3,205,396	-				+0.5
3,205,396	-				+0.4
3,205,396	-				+0.5
3,205,485	-				+0.1
3,205,485	-				-0.3
3,205,512	+				-0.1
3,205,512	+				+1.0
3,205,513	-				+1.2
3,205,569	-				+0.7
3,205,569	-				+0.1
3,205,569	-				+0.9
3,205,610	+				-0.1
3,205,611	-				+0.1
3,205,748	+		Pf6N2E2_2713	0.12	-1.4
3,205,748	+		Pf6N2E2_2713	0.12	-1.1
3,205,748	+		Pf6N2E2_2713	0.12	-1.1
3,205,749	-		Pf6N2E2_2713	0.12	+0.3
3,205,749	-		Pf6N2E2_2713	0.12	-0.2
3,205,749	-		Pf6N2E2_2713	0.12	+0.3
3,205,749	-		Pf6N2E2_2713	0.12	-0.7
3,205,749	-		Pf6N2E2_2713	0.12	-1.4
3,205,749	-		Pf6N2E2_2713	0.12	+0.1
3,205,751	+		Pf6N2E2_2713	0.12	-1.0
3,205,751	+		Pf6N2E2_2713	0.12	+0.9
3,205,751	+		Pf6N2E2_2713	0.12	+0.2
3,205,752	-		Pf6N2E2_2713	0.12	-0.3
3,205,752	-		Pf6N2E2_2713	0.12	+0.1
3,205,752	-		Pf6N2E2_2713	0.12	-0.1
3,205,752	-		Pf6N2E2_2713	0.12	-1.3
3,205,752	-		Pf6N2E2_2713	0.12	+0.0
3,205,752	-		Pf6N2E2_2713	0.12	+0.2
3,205,752	-		Pf6N2E2_2713	0.12	-1.9
3,205,752	-		Pf6N2E2_2713	0.12	+0.5
3,205,752	-		Pf6N2E2_2713	0.12	-0.3
3,205,935	-		Pf6N2E2_2713	0.21	-1.0
3,205,964	+		Pf6N2E2_2713	0.22	-0.4
3,205,964	+		Pf6N2E2_2713	0.22	+0.8
3,205,964	+		Pf6N2E2_2713	0.22	+0.5
3,205,964	+		Pf6N2E2_2713	0.22	-0.3
3,205,964	+		Pf6N2E2_2713	0.22	-0.7
3,205,964	+		Pf6N2E2_2713	0.22	-0.7
3,205,964	+		Pf6N2E2_2713	0.22	-0.7
3,205,964	+		Pf6N2E2_2713	0.22	+0.4
3,205,964	+		Pf6N2E2_2713	0.22	-2.5
3,205,965	-		Pf6N2E2_2713	0.22	+0.4
3,205,965	-		Pf6N2E2_2713	0.22	-0.1
3,205,965	-		Pf6N2E2_2713	0.22	-0.4
3,205,971	+		Pf6N2E2_2713	0.23	-0.8
3,205,972	-		Pf6N2E2_2713	0.23	+0.6
3,205,972	-		Pf6N2E2_2713	0.23	-0.5
3,205,972	-		Pf6N2E2_2713	0.23	-1.9
3,205,972	-		Pf6N2E2_2713	0.23	+1.6
3,206,184	-		Pf6N2E2_2713	0.33	+0.9
3,206,282	-		Pf6N2E2_2713	0.38	-1.7
3,206,315	+		Pf6N2E2_2713	0.39	+1.9
3,206,315	+		Pf6N2E2_2713	0.39	-1.2
3,206,315	+		Pf6N2E2_2713	0.39	+0.6
3,206,316	-		Pf6N2E2_2713	0.39	+0.3
3,206,316	-		Pf6N2E2_2713	0.39	+0.4
3,206,316	-		Pf6N2E2_2713	0.39	+0.9
3,206,316	-		Pf6N2E2_2713	0.39	+0.4
3,206,316	-		Pf6N2E2_2713	0.39	+0.0
3,206,316	-		Pf6N2E2_2713	0.39	+0.4
3,206,316	-		Pf6N2E2_2713	0.39	-0.0
3,206,316	-		Pf6N2E2_2713	0.39	-0.9