Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1613

Experiment: Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.008 mg/ml
1,885,932	+		Pf6N2E2_1612	0.16	-0.5
1,885,933	-		Pf6N2E2_1612	0.17	-0.4
1,886,057	-		Pf6N2E2_1612	0.33	-1.2
1,886,367	+		Pf6N2E2_1612	0.73	+0.6
1,886,367	+		Pf6N2E2_1612	0.73	+2.4
1,886,367	+		Pf6N2E2_1612	0.73	-0.1
1,886,367	+		Pf6N2E2_1612	0.73	-1.2
1,886,368	-		Pf6N2E2_1612	0.73	-1.8
1,886,368	-		Pf6N2E2_1612	0.73	-0.0
1,886,451	+		Pf6N2E2_1612	0.84	-0.2
1,886,451	+		Pf6N2E2_1612	0.84	+1.3
1,886,451	+		Pf6N2E2_1612	0.84	+1.4
1,886,451	+		Pf6N2E2_1612	0.84	+0.6
1,886,609	-				-0.1
1,886,698	+				-0.1
1,886,745	+				+1.2
1,886,766	-				-0.5
1,886,787	-				+2.9
1,886,791	+				+0.4
1,887,201	+		Pf6N2E2_1613	0.59	-0.9
1,887,201	+		Pf6N2E2_1613	0.59	-0.2
1,887,202	-		Pf6N2E2_1613	0.59	-0.8
1,887,202	-		Pf6N2E2_1613	0.59	-1.7
1,887,202	-		Pf6N2E2_1613	0.59	+0.0
1,887,460	-				-0.1
1,887,460	-				+0.5
1,887,489	+				+0.2
1,887,489	+				-0.7
1,887,489	+				-0.6
1,887,491	+				+0.1
1,887,492	-				-0.4
1,887,492	-				+0.8
1,887,492	-				+0.2
1,887,521	+				+1.0
1,887,521	+				+0.1
1,887,522	-				-0.4
1,887,533	+				-0.4
1,887,533	+				-0.0
1,887,533	+				+0.2
1,887,534	-				-0.6
1,887,551	+				+0.0
1,887,551	+				-0.1
1,887,551	+				-0.9
1,887,591	+				-0.7
1,887,879	-		Pf6N2E2_1614	0.17	-0.8
1,887,879	-		Pf6N2E2_1614	0.17	-0.2
1,887,965	+		Pf6N2E2_1614	0.26	+0.5
1,887,965	+		Pf6N2E2_1614	0.26	-1.6
1,887,966	-		Pf6N2E2_1614	0.27	-0.5
1,887,969	+		Pf6N2E2_1614	0.27	+0.4
1,887,970	-		Pf6N2E2_1614	0.27	-0.7
1,887,970	-		Pf6N2E2_1614	0.27	-0.1
1,887,970	-		Pf6N2E2_1614	0.27	+0.5
1,888,208	-		Pf6N2E2_1614	0.53	+0.6
1,888,336	+		Pf6N2E2_1614	0.67	+1.1
1,888,452	+		Pf6N2E2_1614	0.80	+0.4
1,888,453	-		Pf6N2E2_1614	0.80	-1.1
1,888,456	-		Pf6N2E2_1614	0.81	+0.4