Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1255

Experiment: Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.008 mg/ml
1,469,105	+		Pf6N2E2_1254	0.40	-0.8
1,469,167	-		Pf6N2E2_1254	0.44	+0.6
1,469,205	-		Pf6N2E2_1254	0.47	+0.1
1,469,205	-		Pf6N2E2_1254	0.47	-0.5
1,469,205	-		Pf6N2E2_1254	0.47	-0.5
1,469,207	+		Pf6N2E2_1254	0.47	+0.8
1,469,207	+		Pf6N2E2_1254	0.47	-1.5
1,469,207	+		Pf6N2E2_1254	0.47	-0.6
1,469,208	-		Pf6N2E2_1254	0.47	+0.2
1,469,240	+		Pf6N2E2_1254	0.49	-1.2
1,469,240	+		Pf6N2E2_1254	0.49	-0.1
1,469,241	-		Pf6N2E2_1254	0.49	+0.9
1,469,246	+		Pf6N2E2_1254	0.50	+0.4
1,469,247	-		Pf6N2E2_1254	0.50	+0.6
1,469,247	-		Pf6N2E2_1254	0.50	+0.2
1,469,288	+		Pf6N2E2_1254	0.53	+1.1
1,469,288	+		Pf6N2E2_1254	0.53	+2.0
1,469,288	+		Pf6N2E2_1254	0.53	+2.0
1,469,288	+		Pf6N2E2_1254	0.53	-0.0
1,469,289	-		Pf6N2E2_1254	0.53	-0.7
1,469,289	-		Pf6N2E2_1254	0.53	+0.4
1,469,319	-		Pf6N2E2_1254	0.55	+0.7
1,469,434	+		Pf6N2E2_1254	0.63	-0.2
1,469,434	+		Pf6N2E2_1254	0.63	-1.4
1,469,435	-		Pf6N2E2_1254	0.63	+0.7
1,469,487	-		Pf6N2E2_1254	0.67	+0.2
1,469,549	+		Pf6N2E2_1254	0.71	-0.4
1,469,624	+		Pf6N2E2_1254	0.76	+0.4
1,469,625	-		Pf6N2E2_1254	0.76	+0.0
1,469,625	-		Pf6N2E2_1254	0.76	+0.5
1,469,625	-		Pf6N2E2_1254	0.76	+0.6
1,469,625	-		Pf6N2E2_1254	0.76	-0.8
1,469,663	+		Pf6N2E2_1254	0.79	+1.1
1,469,664	-		Pf6N2E2_1254	0.79	+0.8
1,469,721	-		Pf6N2E2_1254	0.83	+1.0
1,469,721	-		Pf6N2E2_1254	0.83	-1.5
1,469,798	+		Pf6N2E2_1254	0.88	+0.4
1,469,799	-		Pf6N2E2_1254	0.89	+1.1
1,469,799	-		Pf6N2E2_1254	0.89	+0.9
1,469,883	+				+0.0
1,469,883	+				-1.7
1,469,883	+				+1.7
1,469,894	+				+1.3
1,469,894	+				+0.8
1,469,894	+				-0.8
1,469,895	-				-0.6
1,469,895	-				+0.3
1,469,895	-				+0.1
1,469,895	-				-0.5
1,469,895	-				-0.6
1,469,929	-				-1.1
1,469,929	-				+1.1
1,469,929	-				-0.6
1,469,964	-				+2.0
1,470,077	+				-1.1
1,470,078	-				-2.8
1,470,078	-				+0.6
1,470,078	-				-0.5
1,470,078	-				-1.2
1,470,079	+				+1.0
1,470,079	+				-0.2
1,470,080	-				-1.8
1,470,080	-				+1.1
1,470,080	-				-0.4
1,470,080	-				-1.8
1,470,080	-				-0.0
1,470,080	-				-0.2
1,470,102	+				-0.3
1,470,103	-				+0.5
1,470,103	-				-1.6
1,470,103	-				-0.9
1,470,231	-		Pf6N2E2_1255	0.13	+0.1
1,470,348	-		Pf6N2E2_1255	0.22	-0.5
1,470,364	+		Pf6N2E2_1255	0.24	-0.6
1,470,380	+		Pf6N2E2_1255	0.25	-0.8
1,470,380	+		Pf6N2E2_1255	0.25	+0.2
1,470,381	-		Pf6N2E2_1255	0.25	-0.1
1,470,541	+		Pf6N2E2_1255	0.38	+1.1
1,470,607	-		Pf6N2E2_1255	0.44	-0.4
1,470,719	-		Pf6N2E2_1255	0.53	-0.4
1,470,774	-		Pf6N2E2_1255	0.58	-0.0
1,470,783	-		Pf6N2E2_1255	0.58	-0.3
1,470,814	+		Pf6N2E2_1255	0.61	+0.6
1,470,814	+		Pf6N2E2_1255	0.61	-0.9
1,470,815	-		Pf6N2E2_1255	0.61	+1.0
1,470,815	-		Pf6N2E2_1255	0.61	-0.3
1,470,815	-		Pf6N2E2_1255	0.61	-1.7
1,470,864	+		Pf6N2E2_1255	0.65	-0.1
1,470,864	+		Pf6N2E2_1255	0.65	-1.0
1,470,865	-		Pf6N2E2_1255	0.65	-0.3
1,470,865	-		Pf6N2E2_1255	0.65	+1.7
1,470,938	+		Pf6N2E2_1255	0.71	+0.8
1,470,938	+		Pf6N2E2_1255	0.71	-0.1
1,470,938	+		Pf6N2E2_1255	0.71	+0.3
1,470,939	-		Pf6N2E2_1255	0.71	+0.8
1,470,939	-		Pf6N2E2_1255	0.71	+0.5
1,470,939	-		Pf6N2E2_1255	0.71	-0.6
1,470,939	-		Pf6N2E2_1255	0.71	+0.2
1,470,959	+		Pf6N2E2_1255	0.73	-1.3
1,471,094	+		Pf6N2E2_1255	0.84	-0.0
1,471,094	+		Pf6N2E2_1255	0.84	-0.6
1,471,094	+		Pf6N2E2_1255	0.84	-0.0
1,471,094	+		Pf6N2E2_1255	0.84	+1.0
1,471,095	-		Pf6N2E2_1255	0.84	-0.0
1,471,095	-		Pf6N2E2_1255	0.84	+0.3
1,471,095	-		Pf6N2E2_1255	0.84	-0.4
1,471,095	-		Pf6N2E2_1255	0.84	+0.9
1,471,095	-		Pf6N2E2_1255	0.84	+0.7
1,471,218	-				+1.5
1,471,218	-				-0.0
1,471,336	+				-0.0
1,471,337	-				+0.4
1,471,337	-				-1.3
1,471,403	-				+0.9
1,471,418	+				+0.6
1,471,418	+				+0.1
1,471,419	-				-0.6
1,471,419	-				+0.5
1,471,419	-				+0.7
1,471,419	-				+0.4
1,471,435	+				+0.5
1,471,436	-				+0.0
1,471,452	-				+0.7
1,471,452	-				-0.6
1,471,452	-				+0.3
1,471,452	-				+0.8
1,471,523	+				+0.4
1,471,524	-				+1.4
1,471,575	+				+0.3
1,471,575	+				-0.2
1,471,576	-		Pf6N2E2_1256	0.10	-0.2
1,471,576	-		Pf6N2E2_1256	0.10	+0.8
1,471,576	-		Pf6N2E2_1256	0.10	-0.2
1,471,576	-		Pf6N2E2_1256	0.10	-0.5
1,471,610	+		Pf6N2E2_1256	0.14	+0.3
1,471,660	-		Pf6N2E2_1256	0.19	-0.9
1,471,767	-		Pf6N2E2_1256	0.31	+0.0
1,471,767	-		Pf6N2E2_1256	0.31	+0.1
1,471,781	-		Pf6N2E2_1256	0.33	+0.0
1,471,867	+		Pf6N2E2_1256	0.42	-1.7
1,471,868	-		Pf6N2E2_1256	0.42	+0.2
1,471,884	+		Pf6N2E2_1256	0.44	+1.3
1,471,884	+		Pf6N2E2_1256	0.44	+1.1
1,471,885	-				+3.0
1,471,885	-		Pf6N2E2_1256	0.44	+0.8
1,471,914	+		Pf6N2E2_1256	0.48	-0.6