Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1250

Experiment: Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.008 mg/ml
1,460,399	+		Pf6N2E2_1249	0.17	-0.2
1,460,400	-		Pf6N2E2_1249	0.17	+0.3
1,460,432	+		Pf6N2E2_1249	0.21	+0.0
1,460,495	+		Pf6N2E2_1249	0.27	+1.5
1,460,552	+		Pf6N2E2_1249	0.34	-0.3
1,460,552	+		Pf6N2E2_1249	0.34	+0.1
1,460,634	+		Pf6N2E2_1249	0.42	-0.5
1,460,635	-		Pf6N2E2_1249	0.43	-0.2
1,460,963	+		Pf6N2E2_1249	0.78	+0.5
1,461,149	+				-0.5
1,461,149	+				+0.3
1,461,149	+				-0.3
1,461,190	+				-0.4
1,461,279	+				+0.5
1,461,312	-				+0.1
1,461,312	-				+0.7
1,461,519	-				+0.8
1,461,519	-				+0.2
1,461,639	-		Pf6N2E2_1250	0.14	-0.4
1,461,737	+		Pf6N2E2_1250	0.19	+0.4
1,461,740	+		Pf6N2E2_1250	0.19	-2.6
1,461,740	+		Pf6N2E2_1250	0.19	-1.1
1,461,740	+		Pf6N2E2_1250	0.19	-0.5
1,461,741	-		Pf6N2E2_1250	0.19	-0.5
1,461,975	-		Pf6N2E2_1250	0.29	+0.3
1,461,975	-		Pf6N2E2_1250	0.29	+0.4
1,461,975	-		Pf6N2E2_1250	0.29	-0.1
1,461,975	-		Pf6N2E2_1250	0.29	+0.1
1,461,975	-		Pf6N2E2_1250	0.29	-0.7
1,461,975	-		Pf6N2E2_1250	0.29	-0.6
1,462,074	+		Pf6N2E2_1250	0.34	+2.0
1,462,132	+		Pf6N2E2_1250	0.36	+0.2
1,462,133	-		Pf6N2E2_1250	0.36	-0.1
1,462,133	-		Pf6N2E2_1250	0.36	-1.0
1,462,133	-		Pf6N2E2_1250	0.36	+0.0
1,462,133	-		Pf6N2E2_1250	0.36	-0.1
1,462,157	+		Pf6N2E2_1250	0.37	+0.5
1,462,191	-		Pf6N2E2_1250	0.39	-0.9
1,462,209	-		Pf6N2E2_1250	0.40	+1.1
1,462,209	-		Pf6N2E2_1250	0.40	+0.4
1,462,368	-		Pf6N2E2_1250	0.47	+0.1
1,462,445	+		Pf6N2E2_1250	0.50	-0.2
1,462,446	-		Pf6N2E2_1250	0.50	+1.6
1,462,584	+		Pf6N2E2_1250	0.56	+0.3
1,462,585	-		Pf6N2E2_1250	0.56	+1.0
1,462,585	-		Pf6N2E2_1250	0.56	+0.1
1,462,585	-		Pf6N2E2_1250	0.56	+0.5
1,462,585	-		Pf6N2E2_1250	0.56	-0.7
1,462,619	+		Pf6N2E2_1250	0.58	+0.1
1,462,649	+		Pf6N2E2_1250	0.59	+0.8
1,462,674	-		Pf6N2E2_1250	0.60	-0.1
1,462,674	-		Pf6N2E2_1250	0.60	-0.3
1,462,736	+		Pf6N2E2_1250	0.63	-0.9
1,462,737	-		Pf6N2E2_1250	0.63	+0.7
1,462,737	-		Pf6N2E2_1250	0.63	-0.6
1,462,957	-				+2.1
1,462,958	+		Pf6N2E2_1250	0.72	-0.4
1,462,958	+		Pf6N2E2_1250	0.72	+0.1
1,462,959	-		Pf6N2E2_1250	0.73	+0.8
1,462,959	-		Pf6N2E2_1250	0.73	+1.0
1,462,959	-		Pf6N2E2_1250	0.73	+0.0
1,462,959	-		Pf6N2E2_1250	0.73	-0.5
1,462,959	-		Pf6N2E2_1250	0.73	+0.6
1,462,959	-		Pf6N2E2_1250	0.73	-1.3
1,463,123	+		Pf6N2E2_1250	0.80	-1.0
1,463,123	+		Pf6N2E2_1250	0.80	-0.4
1,463,123	+		Pf6N2E2_1250	0.80	-0.9
1,463,124	-		Pf6N2E2_1250	0.80	+1.3
1,463,124	-		Pf6N2E2_1250	0.80	-0.2
1,463,126	+		Pf6N2E2_1250	0.80	-1.0
1,463,126	+		Pf6N2E2_1250	0.80	-0.0
1,463,127	-		Pf6N2E2_1250	0.80	+0.4
1,463,205	-		Pf6N2E2_1250	0.83	+0.4
1,463,261	+		Pf6N2E2_1250	0.86	-0.7
1,463,262	-		Pf6N2E2_1250	0.86	+0.1
1,463,262	-		Pf6N2E2_1250	0.86	-1.3
1,463,262	-		Pf6N2E2_1250	0.86	+0.8
1,463,274	-		Pf6N2E2_1250	0.86	-0.4
1,463,395	-				-0.5
1,463,425	-				+0.3
1,463,425	-				+0.8
1,463,441	-				+0.5
1,463,496	-				-1.9
1,463,496	-				-0.0
1,463,661	+				+0.5
1,463,797	+				-0.3
1,463,839	-				+0.8
1,463,921	+				-0.1
1,463,922	-				+0.7
1,464,018	+				-1.1
1,464,018	+				+1.2
1,464,018	+				-0.6
1,464,176	+				+0.4
1,464,177	-				-0.8
1,464,263	+		Pf6N2E2_1251	0.15	+0.4
1,464,263	+		Pf6N2E2_1251	0.15	+0.8
1,464,399	+		Pf6N2E2_1251	0.32	+0.2
1,464,399	+		Pf6N2E2_1251	0.32	+1.2
1,464,399	+		Pf6N2E2_1251	0.32	-0.5
1,464,400	-		Pf6N2E2_1251	0.32	+0.2
1,464,400	-		Pf6N2E2_1251	0.32	+0.8
1,464,400	-		Pf6N2E2_1251	0.32	-0.0
1,464,403	+		Pf6N2E2_1251	0.32	+0.7
1,464,403	+		Pf6N2E2_1251	0.32	-2.4
1,464,403	+		Pf6N2E2_1251	0.32	+1.2
1,464,403	+		Pf6N2E2_1251	0.32	+0.2
1,464,403	+		Pf6N2E2_1251	0.32	-0.1
1,464,404	-		Pf6N2E2_1251	0.32	+2.2
1,464,404	-		Pf6N2E2_1251	0.32	+1.0