Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2864

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
2,975,204	+		Ga0059261_2863	0.61	+0.3
2,975,204	+		Ga0059261_2863	0.61	+0.4
2,975,204	+		Ga0059261_2863	0.61	+0.5
2,975,204	+		Ga0059261_2863	0.61	-0.2
2,975,205	-		Ga0059261_2863	0.61	+0.3
2,975,205	-		Ga0059261_2863	0.61	+0.4
2,975,205	-		Ga0059261_2863	0.61	+0.1
2,975,205	-		Ga0059261_2863	0.61	-0.0
2,975,280	+		Ga0059261_2863	0.65	-0.7
2,975,281	-		Ga0059261_2863	0.65	+0.2
2,975,281	-		Ga0059261_2863	0.65	-0.1
2,975,298	+		Ga0059261_2863	0.66	-0.3
2,975,298	+		Ga0059261_2863	0.66	-0.4
2,975,299	-		Ga0059261_2863	0.66	+0.3
2,975,299	-		Ga0059261_2863	0.66	+0.4
2,975,299	-		Ga0059261_2863	0.66	-0.8
2,975,390	+		Ga0059261_2863	0.70	-0.8
2,975,391	-		Ga0059261_2863	0.70	+0.7
2,975,760	+		Ga0059261_2863	0.87	-0.4
2,975,795	+		Ga0059261_2863	0.89	-0.5
2,975,795	+		Ga0059261_2863	0.89	+0.4
2,975,796	-		Ga0059261_2863	0.89	-0.3
2,975,860	-				-0.6
2,975,860	-				-0.3
2,975,868	+				+0.4
2,975,868	+				-2.3
2,975,868	+				+0.2
2,975,868	+				+0.2
2,975,869	-				+0.1
2,975,869	-				+0.2
2,975,949	-				+0.0
2,975,949	-				+0.3
2,975,949	-				-0.3
2,976,060	+				+0.7
2,976,060	+				-0.4
2,976,060	+				+0.0
2,976,060	+				-0.1
2,976,060	+				+0.5
2,976,060	+				+0.3
2,976,061	-				-0.9
2,976,061	-				+0.1
2,976,061	-				+0.5
2,976,061	-				+0.3
2,976,061	-				+1.1
2,976,061	-				+0.2
2,976,195	+		Ga0059261_2864	0.19	-0.0
2,976,195	+		Ga0059261_2864	0.19	-0.9
2,976,195	+		Ga0059261_2864	0.19	-0.5
2,976,195	+		Ga0059261_2864	0.19	+0.4
2,976,196	-		Ga0059261_2864	0.19	-0.5
2,976,196	-		Ga0059261_2864	0.19	+0.7
2,976,196	-		Ga0059261_2864	0.19	-0.6
2,976,242	+		Ga0059261_2864	0.25	+0.3
2,976,242	+		Ga0059261_2864	0.25	-0.2
2,976,242	+		Ga0059261_2864	0.25	-0.0
2,976,243	-		Ga0059261_2864	0.25	+0.3
2,976,243	-		Ga0059261_2864	0.25	+1.1
2,976,243	-		Ga0059261_2864	0.25	-0.7
2,976,248	+		Ga0059261_2864	0.26	-0.7
2,976,248	+		Ga0059261_2864	0.26	+0.2
2,976,249	-		Ga0059261_2864	0.26	+0.1
2,976,249	-		Ga0059261_2864	0.26	+0.1
2,976,306	+		Ga0059261_2864	0.32	+0.3
2,976,306	+		Ga0059261_2864	0.32	-1.9
2,976,306	+		Ga0059261_2864	0.32	-0.1
2,976,306	+		Ga0059261_2864	0.32	-0.3
2,976,306	+		Ga0059261_2864	0.32	-0.3
2,976,306	+		Ga0059261_2864	0.32	+0.2
2,976,306	+		Ga0059261_2864	0.32	-0.1
2,976,307	-		Ga0059261_2864	0.32	-0.3
2,976,307	-		Ga0059261_2864	0.32	-0.2
2,976,307	-		Ga0059261_2864	0.32	-0.6
2,976,307	-		Ga0059261_2864	0.32	+2.1
2,976,307	-		Ga0059261_2864	0.32	+0.2
2,976,307	-		Ga0059261_2864	0.32	-0.4
2,976,384	+		Ga0059261_2864	0.41	+1.0
2,976,385	-		Ga0059261_2864	0.41	-0.4
2,976,385	-		Ga0059261_2864	0.41	-1.2
2,976,385	-		Ga0059261_2864	0.41	-0.7
2,976,426	+		Ga0059261_2864	0.46	+0.2
2,976,426	+		Ga0059261_2864	0.46	-0.7
2,976,427	-		Ga0059261_2864	0.46	+0.4
2,976,427	-		Ga0059261_2864	0.46	+0.6
2,976,875	+				+0.1
2,976,876	+				+0.7
2,976,876	+				-0.2
2,976,877	-				+0.1
2,976,877	-				+0.4
2,976,877	-				+0.1
2,976,877	-				-0.0
2,976,877	-				+0.2
2,976,942	+				-0.2
2,976,942	+				-1.9
2,976,942	+				+0.0
2,976,943	-				-0.3
2,976,943	-				-0.0
2,976,943	-				+0.3
2,976,943	-				-0.3
2,976,943	-				+0.8
2,976,943	-				+0.0
2,977,105	-				+0.2
2,977,105	-				+1.7
2,977,126	+		Ga0059261_2865	0.10	+0.7
2,977,126	+		Ga0059261_2865	0.10	+0.0
2,977,126	+		Ga0059261_2865	0.10	-1.9
2,977,126	+		Ga0059261_2865	0.10	+0.5
2,977,126	+		Ga0059261_2865	0.10	+0.3
2,977,126	+		Ga0059261_2865	0.10	-0.3
2,977,126	+		Ga0059261_2865	0.10	-0.5
2,977,127	-		Ga0059261_2865	0.10	+1.2
2,977,127	-		Ga0059261_2865	0.10	-0.8
2,977,127	-		Ga0059261_2865	0.10	+0.2
2,977,127	-		Ga0059261_2865	0.10	+0.0
2,977,127	-		Ga0059261_2865	0.10	+0.5
2,977,127	-				-0.5
2,977,127	-		Ga0059261_2865	0.10	-0.5
2,977,127	-		Ga0059261_2865	0.10	+0.1
2,977,128	+		Ga0059261_2865	0.10	-0.3
2,977,128	+		Ga0059261_2865	0.10	+0.1
2,977,128	+		Ga0059261_2865	0.10	+0.3
2,977,129	-		Ga0059261_2865	0.10	+0.5
2,977,129	-				-0.7
2,977,306	+		Ga0059261_2865	0.18	+0.4
2,977,306	+		Ga0059261_2865	0.18	+0.3
2,977,306	+		Ga0059261_2865	0.18	+0.6
2,977,306	+		Ga0059261_2865	0.18	-0.0
2,977,307	-		Ga0059261_2865	0.19	+0.5
2,977,307	-		Ga0059261_2865	0.19	-0.3
2,977,307	-		Ga0059261_2865	0.19	+0.5
2,977,307	-		Ga0059261_2865	0.19	-1.6
2,977,307	-		Ga0059261_2865	0.19	-0.0
2,977,308	+		Ga0059261_2865	0.19	+0.3
2,977,308	+		Ga0059261_2865	0.19	-0.0
2,977,308	+		Ga0059261_2865	0.19	-0.8
2,977,308	+		Ga0059261_2865	0.19	+0.3
2,977,308	+		Ga0059261_2865	0.19	-0.3
2,977,308	+		Ga0059261_2865	0.19	+0.1
2,977,309	-		Ga0059261_2865	0.19	+0.7
2,977,309	-		Ga0059261_2865	0.19	+0.6
2,977,309	-		Ga0059261_2865	0.19	+0.0
2,977,321	-		Ga0059261_2865	0.19	-0.3
2,977,321	-		Ga0059261_2865	0.19	-0.2
2,977,330	+		Ga0059261_2865	0.20	-0.3
2,977,330	+		Ga0059261_2865	0.20	+0.1
2,977,330	+		Ga0059261_2865	0.20	+0.3
2,977,331	-		Ga0059261_2865	0.20	+0.2
2,977,634	+		Ga0059261_2865	0.34	-0.2
2,977,635	-		Ga0059261_2865	0.34	-0.2
2,977,635	-		Ga0059261_2865	0.34	+0.2
2,977,753	+		Ga0059261_2865	0.39	-1.3
2,977,753	+		Ga0059261_2865	0.39	+0.7
2,977,753	+		Ga0059261_2865	0.39	+0.3
2,977,753	+		Ga0059261_2865	0.39	+0.8
2,977,753	+		Ga0059261_2865	0.39	+0.0
2,977,775	-		Ga0059261_2865	0.40	+0.3
2,977,775	-		Ga0059261_2865	0.40	-0.4
2,977,775	-		Ga0059261_2865	0.40	+0.3
2,977,797	+		Ga0059261_2865	0.41	-0.2
2,977,798	-		Ga0059261_2865	0.41	+0.0