Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2592

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
2,674,900	+		Ga0059261_2591	0.62	-0.6
2,675,019	+		Ga0059261_2591	0.68	+0.3
2,675,019	+		Ga0059261_2591	0.68	+0.2
2,675,019	+		Ga0059261_2591	0.68	+0.7
2,675,019	+		Ga0059261_2591	0.68	+0.1
2,675,020	-		Ga0059261_2591	0.68	-0.3
2,675,020	-		Ga0059261_2591	0.68	+0.2
2,675,020	-		Ga0059261_2591	0.68	-0.2
2,675,020	-		Ga0059261_2591	0.68	+0.1
2,675,097	+		Ga0059261_2591	0.71	-0.1
2,675,097	+		Ga0059261_2591	0.71	+0.4
2,675,097	+		Ga0059261_2591	0.71	-0.4
2,675,112	+		Ga0059261_2591	0.72	-1.3
2,675,113	-		Ga0059261_2591	0.72	+0.8
2,675,113	-		Ga0059261_2591	0.72	-0.1
2,675,113	-		Ga0059261_2591	0.72	-0.2
2,675,113	-		Ga0059261_2591	0.72	+0.2
2,675,113	-		Ga0059261_2591	0.72	+0.3
2,675,211	+		Ga0059261_2591	0.77	+0.5
2,675,212	-		Ga0059261_2591	0.77	-0.1
2,675,212	-		Ga0059261_2591	0.77	+0.6
2,675,212	-		Ga0059261_2591	0.77	-0.4
2,675,446	+		Ga0059261_2591	0.87	-1.0
2,675,446	+		Ga0059261_2591	0.87	-0.4
2,675,446	+		Ga0059261_2591	0.87	-0.6
2,675,447	-		Ga0059261_2591	0.87	+0.7
2,675,447	-		Ga0059261_2591	0.87	-0.8
2,675,514	+				-1.3
2,675,514	+				-0.9
2,675,514	+				+0.9
2,675,514	+				-1.1
2,675,514	+				+0.3
2,675,514	+				-0.6
2,675,514	+				-0.1
2,675,514	+				-1.5
2,675,514	+				-0.6
2,675,514	+				+0.0
2,675,514	+				-1.0
2,675,514	+				+1.3
2,675,514	+				+0.6
2,675,515	-				+0.3
2,675,515	-				+0.4
2,675,515	-				+0.2
2,675,799	+				+0.2
2,675,799	+				-0.6
2,675,800	-				-0.0
2,675,800	-				+1.4
2,675,800	-				+0.1
2,675,800	-				-0.7
2,675,855	+				+0.3
2,675,855	+				-0.0
2,676,188	+		Ga0059261_2592	0.28	-0.5
2,676,188	+		Ga0059261_2592	0.28	-0.5
2,676,188	+		Ga0059261_2592	0.28	-0.4
2,676,189	-		Ga0059261_2592	0.28	-0.5
2,676,189	-		Ga0059261_2592	0.28	+0.2
2,676,189	-		Ga0059261_2592	0.28	-0.6
2,676,189	-		Ga0059261_2592	0.28	+0.3
2,676,189	-		Ga0059261_2592	0.28	-0.7
2,676,189	-		Ga0059261_2592	0.28	+0.7
2,676,189	-		Ga0059261_2592	0.28	-0.1
2,676,266	+		Ga0059261_2592	0.34	+0.6
2,676,266	+		Ga0059261_2592	0.34	+0.4
2,676,266	+		Ga0059261_2592	0.34	+0.3
2,676,266	+		Ga0059261_2592	0.34	+0.2
2,676,267	-		Ga0059261_2592	0.35	-0.3
2,676,267	-		Ga0059261_2592	0.35	+0.3
2,676,267	-		Ga0059261_2592	0.35	-0.6
2,676,267	-		Ga0059261_2592	0.35	+0.4
2,676,317	+		Ga0059261_2592	0.39	-0.2
2,676,317	+		Ga0059261_2592	0.39	-0.1
2,676,317	+		Ga0059261_2592	0.39	-1.5
2,676,318	-		Ga0059261_2592	0.39	+0.5
2,676,318	-		Ga0059261_2592	0.39	-0.4
2,676,318	-		Ga0059261_2592	0.39	+0.1
2,676,318	-		Ga0059261_2592	0.39	-0.1
2,676,318	-				+1.7
2,676,332	+		Ga0059261_2592	0.40	+0.2
2,676,332	+		Ga0059261_2592	0.40	-0.6
2,676,332	+		Ga0059261_2592	0.40	-0.4
2,676,333	-		Ga0059261_2592	0.40	+1.7
2,676,333	-		Ga0059261_2592	0.40	+0.0
2,676,422	+		Ga0059261_2592	0.47	-0.4
2,676,464	+		Ga0059261_2592	0.51	-0.2
2,676,464	+		Ga0059261_2592	0.51	-0.1
2,676,464	+		Ga0059261_2592	0.51	-0.3
2,676,464	+		Ga0059261_2592	0.51	-2.2
2,676,464	+		Ga0059261_2592	0.51	+0.2
2,676,464	+				+1.2
2,676,464	+		Ga0059261_2592	0.51	-0.3
2,676,464	+		Ga0059261_2592	0.51	+0.7
2,676,465	-		Ga0059261_2592	0.51	-0.3
2,676,465	-		Ga0059261_2592	0.51	+0.9
2,676,465	-		Ga0059261_2592	0.51	-0.3
2,676,566	+		Ga0059261_2592	0.59	-0.1
2,676,566	+		Ga0059261_2592	0.59	-1.0
2,676,566	+		Ga0059261_2592	0.59	+0.2
2,676,567	-		Ga0059261_2592	0.60	+1.9
2,676,567	-		Ga0059261_2592	0.60	+0.2
2,676,567	-		Ga0059261_2592	0.60	+1.4
2,676,567	-		Ga0059261_2592	0.60	-0.9
2,676,578	+		Ga0059261_2592	0.60	-0.4
2,676,579	-		Ga0059261_2592	0.61	-1.6
2,676,638	+		Ga0059261_2592	0.65	-3.0
2,676,668	+		Ga0059261_2592	0.68	-0.1
2,676,669	-		Ga0059261_2592	0.68	-0.6
2,676,713	+		Ga0059261_2592	0.72	-0.2
2,676,714	-		Ga0059261_2592	0.72	-0.6
2,676,805	+		Ga0059261_2592	0.79	+0.0
2,676,806	-		Ga0059261_2592	0.80	+0.1
2,676,806	-		Ga0059261_2592	0.80	+0.2
2,676,856	+		Ga0059261_2592	0.84	-0.3
2,676,856	+		Ga0059261_2592	0.84	-0.6
2,676,856	+				-0.6
2,676,856	+		Ga0059261_2592	0.84	+0.6
2,676,856	+		Ga0059261_2592	0.84	+0.0
2,676,856	+		Ga0059261_2592	0.84	-0.4
2,676,857	-		Ga0059261_2592	0.84	+0.1
2,676,857	-		Ga0059261_2592	0.84	+0.9
2,676,857	-		Ga0059261_2592	0.84	-0.5
2,676,857	-		Ga0059261_2592	0.84	+0.5
2,676,876	+		Ga0059261_2592	0.85	+0.0
2,676,876	+		Ga0059261_2592	0.85	+0.4
2,676,876	+		Ga0059261_2592	0.85	-0.9
2,676,876	+		Ga0059261_2592	0.85	+0.5
2,676,876	+		Ga0059261_2592	0.85	+0.4
2,676,876	+		Ga0059261_2592	0.85	+0.5
2,676,876	+		Ga0059261_2592	0.85	-2.4
2,676,877	-		Ga0059261_2592	0.85	-0.1
2,676,891	+		Ga0059261_2592	0.87	-0.1
2,676,891	+		Ga0059261_2592	0.87	+0.2
2,676,891	+		Ga0059261_2592	0.87	+0.2
2,676,892	-		Ga0059261_2592	0.87	-0.1
2,676,892	-		Ga0059261_2592	0.87	+0.2
2,676,923	+		Ga0059261_2592	0.89	-0.1
2,676,923	+		Ga0059261_2592	0.89	-0.5
2,676,924	-		Ga0059261_2592	0.89	+0.2
2,676,924	-		Ga0059261_2592	0.89	-0.2
2,676,961	+				+0.3
2,676,962	-				-0.4
2,676,962	-				-0.0
2,676,988	+				+0.5
2,676,988	+				+0.4
2,676,988	+				+0.2
2,676,988	+				-1.2
2,676,988	+				+0.1
2,676,988	+				-1.1
2,676,989	-				-0.7
2,676,989	-				+0.3
2,677,001	+				+0.4
2,677,001	+				+0.5
2,677,001	+				-0.7
2,677,002	-				-0.4
2,677,002	-				-0.3
2,677,002	-				+1.5
2,677,002	-				+0.1
2,677,238	+				-1.6
2,677,239	-				+1.2
2,677,242	+				-1.1
2,677,243	+				-0.8
2,677,243	+				+1.0
2,677,243	+				-0.5
2,677,244	-				-0.2
2,677,244	-				+1.3
2,677,273	-				-0.1
2,677,314	-				-0.6
2,677,347	+				-0.4
2,677,347	+				+1.0
2,677,348	-				-0.3
2,677,348	-				+0.7
2,677,360	+				-0.2
2,677,360	+				-0.1
2,677,360	+				-0.3
2,677,360	+				+0.1
2,677,360	+				-0.9
2,677,360	+				+0.1
2,677,360	+				+0.4
2,677,434	+		Ga0059261_2593	0.30	-1.1
2,677,487	+				-1.3
2,677,487	+		Ga0059261_2593	0.48	-2.2
2,677,487	+		Ga0059261_2593	0.48	+0.1
2,677,487	+		Ga0059261_2593	0.48	+1.7
2,677,487	+		Ga0059261_2593	0.48	+0.0
2,677,487	+		Ga0059261_2593	0.48	+0.7
2,677,487	+		Ga0059261_2593	0.48	+0.2
2,677,625	+				-1.0
2,677,625	+				+0.1
2,677,625	+				+0.2
2,677,668	+				-0.3
2,677,669	-				+0.0
2,677,669	-				+0.3
2,677,669	-				+0.8
2,677,728	+				-1.0
2,677,728	+				-0.3
2,677,728	+				+0.7
2,677,728	+				+0.2
2,677,728	+				-0.8
2,677,728	+				-0.2
2,677,728	+				+0.4
2,677,728	+				+0.2
2,677,728	+				-0.1
2,677,728	+				+0.3
2,677,728	+				+0.7
2,677,729	-				-0.6
2,677,729	-				+0.2
2,677,729	-				-0.3
2,677,729	-				-0.2
2,677,729	-				+0.4
2,677,792	+				+0.3
2,677,792	+				+0.0
2,677,792	+				-0.5
2,677,792	+				+0.3
2,677,792	+				+0.4
2,677,856	+				+0.2
2,677,856	+				+0.1
2,677,857	-				+0.1
2,677,857	-				+1.7
2,677,921	+				+0.2
2,677,921	+				+0.3
2,677,921	+				-0.4
2,677,997	+		Ga0059261_2594	0.13	+0.7
2,677,998	-		Ga0059261_2594	0.13	+0.0
2,677,998	-		Ga0059261_2594	0.13	-1.0