Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1436

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
1,513,567	-		Ga0059261_1435	0.39	-0.2
1,513,644	+		Ga0059261_1435	0.44	+0.0
1,513,645	-		Ga0059261_1435	0.44	-0.3
1,513,645	-		Ga0059261_1435	0.44	-0.6
1,513,854	-		Ga0059261_1435	0.59	+0.0
1,514,210	+		Ga0059261_1435	0.83	-0.4
1,514,210	+		Ga0059261_1435	0.83	-0.8
1,514,210	+		Ga0059261_1435	0.83	+0.6
1,514,211	-		Ga0059261_1435	0.83	+0.6
1,514,316	+				-0.1
1,514,316	+				-0.4
1,514,317	-				-0.0
1,514,317	-				-0.1
1,514,317	-				-0.1
1,514,387	+				+0.3
1,514,387	+				-0.2
1,514,387	+				+0.1
1,514,387	+				-0.4
1,514,387	+				+0.7
1,514,388	-				-0.2
1,514,388	-				+0.3
1,514,388	-				-0.5
1,514,599	-				-0.4
1,514,599	-				+0.1
1,514,599	-				-0.5
1,514,599	-				-0.1
1,514,655	-				-0.4
1,514,749	+				+0.2
1,514,749	+				-0.6
1,514,749	+				-1.2
1,514,749	+				-0.1
1,514,749	+				-1.7
1,514,749	+				-0.4
1,514,749	+				-0.7
1,514,750	-				-0.4
1,514,750	-				+0.1
1,514,750	-				+0.4
1,514,750	-				-1.0
1,514,750	-				-0.4
1,514,750	-				-0.7
1,514,750	-				+0.7
1,514,751	+				-0.6
1,514,751	+				+1.2
1,514,751	+				+0.2
1,514,751	+				-0.9
1,514,752	-				-0.5
1,514,752	-				-0.2
1,514,752	-				-0.9
1,514,752	-				-1.7
1,514,769	+				-0.5
1,514,770	-				-0.2
1,514,770	-				-0.8
1,514,770	-				-0.4
1,514,770	-				-0.8
1,514,770	-				-0.5
1,514,770	-				+0.2
1,514,916	+		Ga0059261_1436	0.12	-0.7
1,514,917	-		Ga0059261_1436	0.12	-0.5
1,514,929	+		Ga0059261_1436	0.12	-0.4
1,514,929	+		Ga0059261_1436	0.12	-0.3
1,514,930	-		Ga0059261_1436	0.12	-0.2
1,514,930	-		Ga0059261_1436	0.12	-0.8
1,514,930	-		Ga0059261_1436	0.12	+0.4
1,514,973	+		Ga0059261_1436	0.14	-1.1
1,514,973	+				+1.0
1,514,973	+		Ga0059261_1436	0.14	-0.5
1,514,973	+		Ga0059261_1436	0.14	-0.8
1,514,973	+		Ga0059261_1436	0.14	-0.1
1,514,973	+		Ga0059261_1436	0.14	-0.4
1,514,974	-		Ga0059261_1436	0.14	-0.5
1,514,974	-		Ga0059261_1436	0.14	-0.5
1,514,974	-		Ga0059261_1436	0.14	+0.2
1,514,974	-		Ga0059261_1436	0.14	-0.7
1,514,974	-		Ga0059261_1436	0.14	-0.6
1,514,974	-		Ga0059261_1436	0.14	-0.9
1,514,974	-		Ga0059261_1436	0.14	+0.1
1,514,974	-		Ga0059261_1436	0.14	-0.2
1,514,976	+		Ga0059261_1436	0.14	-0.8
1,514,977	-		Ga0059261_1436	0.14	+1.3
1,514,977	-		Ga0059261_1436	0.14	-0.1
1,514,977	-		Ga0059261_1436	0.14	-0.1
1,514,977	-		Ga0059261_1436	0.14	-0.2
1,514,977	-		Ga0059261_1436	0.14	-0.8
1,515,024	+		Ga0059261_1436	0.15	+0.1
1,515,024	+		Ga0059261_1436	0.15	-1.4
1,515,025	-		Ga0059261_1436	0.15	-0.6
1,515,025	-		Ga0059261_1436	0.15	+0.3
1,515,027	+		Ga0059261_1436	0.16	+0.2
1,515,027	+		Ga0059261_1436	0.16	-1.3
1,515,028	-		Ga0059261_1436	0.16	-0.4
1,515,028	-		Ga0059261_1436	0.16	+0.3
1,515,082	+		Ga0059261_1436	0.17	-0.2
1,515,082	+		Ga0059261_1436	0.17	+0.7
1,515,082	+		Ga0059261_1436	0.17	-0.5
1,515,083	-		Ga0059261_1436	0.17	-0.8
1,515,083	-		Ga0059261_1436	0.17	+0.4
1,515,083	-		Ga0059261_1436	0.17	+0.2
1,515,083	-		Ga0059261_1436	0.17	-0.2
1,515,083	-		Ga0059261_1436	0.17	-0.8
1,515,084	+		Ga0059261_1436	0.17	+0.4
1,515,090	+		Ga0059261_1436	0.18	-1.4
1,515,090	+		Ga0059261_1436	0.18	+0.2
1,515,091	-		Ga0059261_1436	0.18	+0.5
1,515,091	-		Ga0059261_1436	0.18	-0.4
1,515,091	-		Ga0059261_1436	0.18	+0.1
1,515,091	-		Ga0059261_1436	0.18	+0.4
1,515,258	+		Ga0059261_1436	0.23	+0.1
1,515,312	+				+0.2
1,515,325	-		Ga0059261_1436	0.25	-0.4
1,515,325	-		Ga0059261_1436	0.25	-0.2
1,515,325	-		Ga0059261_1436	0.25	-0.2
1,515,419	-		Ga0059261_1436	0.28	+0.2
1,515,494	-		Ga0059261_1436	0.31	-0.2
1,515,495	+		Ga0059261_1436	0.31	-1.6
1,515,495	+		Ga0059261_1436	0.31	-0.3
1,515,495	+		Ga0059261_1436	0.31	+0.1
1,515,495	+		Ga0059261_1436	0.31	+0.6
1,515,495	+		Ga0059261_1436	0.31	-0.7
1,515,495	+		Ga0059261_1436	0.31	-0.5
1,515,496	-				-0.7
1,515,568	+		Ga0059261_1436	0.33	+1.0
1,515,568	+		Ga0059261_1436	0.33	+0.4
1,515,568	+		Ga0059261_1436	0.33	-0.5
1,515,568	+		Ga0059261_1436	0.33	+0.3
1,515,568	+		Ga0059261_1436	0.33	+0.1
1,515,568	+		Ga0059261_1436	0.33	-1.3
1,515,568	+		Ga0059261_1436	0.33	-0.2
1,515,569	-		Ga0059261_1436	0.33	+0.2
1,515,569	-		Ga0059261_1436	0.33	-0.1
1,515,569	-		Ga0059261_1436	0.33	-0.3
1,515,569	-		Ga0059261_1436	0.33	-0.0
1,515,569	-		Ga0059261_1436	0.33	-0.7
1,515,569	-		Ga0059261_1436	0.33	-0.4
1,515,600	+		Ga0059261_1436	0.34	+0.1
1,515,600	+		Ga0059261_1436	0.34	-0.1
1,515,600	+		Ga0059261_1436	0.34	-0.1
1,515,600	+		Ga0059261_1436	0.34	+0.0
1,515,601	-		Ga0059261_1436	0.34	-0.2
1,515,601	-		Ga0059261_1436	0.34	-0.3
1,515,601	-		Ga0059261_1436	0.34	+0.1
1,515,639	+		Ga0059261_1436	0.35	-0.3
1,515,639	+		Ga0059261_1436	0.35	-0.4
1,515,639	+		Ga0059261_1436	0.35	-0.3
1,515,639	+		Ga0059261_1436	0.35	+0.3
1,515,640	-		Ga0059261_1436	0.35	+0.0
1,515,640	-		Ga0059261_1436	0.35	-0.0
1,515,640	-		Ga0059261_1436	0.35	+1.6
1,515,640	-		Ga0059261_1436	0.35	-0.4
1,515,640	-		Ga0059261_1436	0.35	-0.5
1,515,640	-		Ga0059261_1436	0.35	-0.9
1,515,657	+		Ga0059261_1436	0.36	-0.3
1,515,657	+		Ga0059261_1436	0.36	+0.3
1,515,657	+				+0.0
1,515,658	-		Ga0059261_1436	0.36	-0.8
1,515,658	-		Ga0059261_1436	0.36	-0.9
1,515,720	+		Ga0059261_1436	0.38	+0.7
1,515,721	-		Ga0059261_1436	0.38	+0.7
1,515,729	+				+1.2
1,515,729	+		Ga0059261_1436	0.38	-0.3
1,515,779	+				+1.2
1,516,128	+		Ga0059261_1436	0.51	-0.4
1,516,129	-		Ga0059261_1436	0.51	+0.5
1,516,129	-		Ga0059261_1436	0.51	-0.4
1,516,129	-		Ga0059261_1436	0.51	-1.9
1,516,188	+		Ga0059261_1436	0.53	-0.3
1,516,189	-		Ga0059261_1436	0.53	-1.2
1,516,189	-		Ga0059261_1436	0.53	-0.4
1,516,189	-		Ga0059261_1436	0.53	-0.2
1,516,189	-		Ga0059261_1436	0.53	+0.2
1,516,233	+		Ga0059261_1436	0.55	-2.2
1,516,234	-		Ga0059261_1436	0.55	+0.0
1,516,251	+		Ga0059261_1436	0.55	+0.2
1,516,367	+		Ga0059261_1436	0.59	+1.6
1,516,368	-		Ga0059261_1436	0.59	-0.7
1,516,377	+		Ga0059261_1436	0.59	+0.5
1,516,377	+		Ga0059261_1436	0.59	+0.0
1,516,377	+		Ga0059261_1436	0.59	-0.3
1,516,378	-		Ga0059261_1436	0.59	-0.4
1,516,378	-		Ga0059261_1436	0.59	-1.2
1,516,378	-		Ga0059261_1436	0.59	-0.2
1,516,378	-		Ga0059261_1436	0.59	-0.3
1,516,378	-		Ga0059261_1436	0.59	-0.2
1,516,381	+		Ga0059261_1436	0.60	-1.1
1,516,381	+		Ga0059261_1436	0.60	-0.6
1,516,381	+		Ga0059261_1436	0.60	-1.2
1,516,381	+		Ga0059261_1436	0.60	+0.4
1,516,381	+		Ga0059261_1436	0.60	+0.5
1,516,382	-		Ga0059261_1436	0.60	+1.0
1,516,382	-		Ga0059261_1436	0.60	-1.0
1,516,479	+		Ga0059261_1436	0.63	-0.2
1,516,479	+		Ga0059261_1436	0.63	-0.8
1,516,480	-		Ga0059261_1436	0.63	-0.1
1,516,480	-		Ga0059261_1436	0.63	-0.6
1,516,520	-		Ga0059261_1436	0.64	+0.7
1,516,575	+		Ga0059261_1436	0.66	-0.8
1,516,575	+		Ga0059261_1436	0.66	-0.4
1,516,575	+		Ga0059261_1436	0.66	-0.5
1,516,576	-		Ga0059261_1436	0.66	-0.3
1,516,576	-		Ga0059261_1436	0.66	+0.1
1,516,602	+		Ga0059261_1436	0.67	-0.9
1,516,602	+		Ga0059261_1436	0.67	-0.6
1,516,602	+		Ga0059261_1436	0.67	+0.1
1,516,603	-		Ga0059261_1436	0.67	-0.5
1,516,650	+		Ga0059261_1436	0.68	-0.1
1,516,650	+		Ga0059261_1436	0.68	+0.0
1,516,651	-		Ga0059261_1436	0.68	+0.0
1,516,651	-		Ga0059261_1436	0.68	-1.1
1,516,651	-		Ga0059261_1436	0.68	+0.2
1,516,651	-		Ga0059261_1436	0.68	+0.4
1,516,651	-		Ga0059261_1436	0.68	-0.3
1,516,671	+		Ga0059261_1436	0.69	-0.1
1,516,671	+		Ga0059261_1436	0.69	-0.0
1,516,671	+		Ga0059261_1436	0.69	+1.2
1,516,671	+		Ga0059261_1436	0.69	-0.9
1,516,671	+		Ga0059261_1436	0.69	+1.4
1,516,671	+		Ga0059261_1436	0.69	+0.2
1,516,672	-		Ga0059261_1436	0.69	+0.5
1,516,672	-		Ga0059261_1436	0.69	-0.6
1,516,672	-		Ga0059261_1436	0.69	-0.5
1,516,672	-		Ga0059261_1436	0.69	+0.0
1,516,672	-		Ga0059261_1436	0.69	-1.0
1,516,672	-		Ga0059261_1436	0.69	+0.2
1,516,672	-		Ga0059261_1436	0.69	+0.4
1,516,672	-		Ga0059261_1436	0.69	-0.3
1,516,672	-		Ga0059261_1436	0.69	-0.2
1,516,816	+		Ga0059261_1436	0.74	-0.0
1,516,817	-		Ga0059261_1436	0.74	-0.6
1,516,989	+		Ga0059261_1436	0.79	+0.1
1,516,990	-		Ga0059261_1436	0.79	+0.4
1,516,990	-		Ga0059261_1436	0.79	+0.9
1,517,067	+		Ga0059261_1436	0.82	-0.5
1,517,067	+		Ga0059261_1436	0.82	+0.5
1,517,067	+		Ga0059261_1436	0.82	-1.2
1,517,067	+		Ga0059261_1436	0.82	+0.2
1,517,067	+		Ga0059261_1436	0.82	+0.3
1,517,068	-		Ga0059261_1436	0.82	-1.5
1,517,068	-		Ga0059261_1436	0.82	-0.5
1,517,068	-		Ga0059261_1436	0.82	-0.3
1,517,068	-		Ga0059261_1436	0.82	+1.4
1,517,068	-		Ga0059261_1436	0.82	+0.8
1,517,068	-		Ga0059261_1436	0.82	+0.5
1,517,348	+				+1.1
1,517,348	+				-1.0
1,517,348	+				+0.7
1,517,349	-				-0.4
1,517,349	-				+0.6
1,517,349	-				-0.3
1,517,407	+				+0.4
1,517,408	-				-0.0
1,517,600	+				-1.1
1,517,601	-				-1.7
1,517,626	+				-0.5
1,517,627	-				-0.3
1,517,627	-				-0.9
1,517,627	-				-0.7
1,517,627	-				-1.0
1,517,659	-				-0.2
1,517,659	-				+0.9
1,517,725	-				+0.3
1,517,770	+				-0.1
1,517,770	+				-0.8
1,517,770	+				-0.7
1,518,238	+		Ga0059261_1437	0.83	-0.9
1,518,239	-		Ga0059261_1437	0.83	+0.0
1,518,239	-		Ga0059261_1437	0.83	-0.1
1,518,239	-		Ga0059261_1437	0.83	+0.0
1,518,239	-		Ga0059261_1437	0.83	-0.0
1,518,271	+		Ga0059261_1437	0.90	-0.2
1,518,271	+		Ga0059261_1437	0.90	-0.1
1,518,271	+		Ga0059261_1437	0.90	+0.0
1,518,271	+				+0.3
1,518,271	+		Ga0059261_1437	0.90	+1.0
1,518,271	+		Ga0059261_1437	0.90	+0.4
1,518,271	+				+1.0
1,518,272	-		Ga0059261_1437	0.90	+0.3
1,518,272	-		Ga0059261_1437	0.90	+1.2
1,518,272	-		Ga0059261_1437	0.90	-0.8
1,518,272	-		Ga0059261_1437	0.90	-0.7
1,518,272	-		Ga0059261_1437	0.90	-0.1
1,518,272	-		Ga0059261_1437	0.90	+0.2
1,518,272	-		Ga0059261_1437	0.90	+0.2
1,518,272	-		Ga0059261_1437	0.90	+0.3
1,518,272	-		Ga0059261_1437	0.90	+0.7
1,518,272	-		Ga0059261_1437	0.90	+0.2
1,518,272	-		Ga0059261_1437	0.90	-0.5
1,518,272	-		Ga0059261_1437	0.90	-1.0
1,518,272	-		Ga0059261_1437	0.90	-0.8
1,518,272	-		Ga0059261_1437	0.90	+0.1
1,518,272	-		Ga0059261_1437	0.90	-0.8
1,518,272	-		Ga0059261_1437	0.90	+0.6