Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02525

Experiment: PYE with Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Carbenicillin 0.1 mg/ml
2,672,616	-		CCNA_02523	0.48	+0.5
2,672,617	-		CCNA_02523	0.48	-0.7
2,672,652	+		CCNA_02523	0.55	+0.7
2,672,703	-		CCNA_02523	0.65	-0.4
2,672,709	+		CCNA_02523	0.66	+1.1
2,672,709	+		CCNA_02523	0.66	+1.3
2,672,717	-		CCNA_02523	0.68	+0.2
2,672,717	-		CCNA_02523	0.68	-0.6
2,672,717	-		CCNA_02523	0.68	+0.5
2,672,725	+		CCNA_02523	0.70	+1.3
2,672,746	+		CCNA_02523	0.74	+1.5
2,672,746	+		CCNA_02523	0.74	+1.1
2,672,751	+		CCNA_02523	0.75	+0.7
2,672,751	+		CCNA_02523	0.75	+1.4
2,672,754	-		CCNA_02523	0.76	+1.3
2,672,754	-		CCNA_02523	0.76	+0.3
2,672,755	+		CCNA_02523	0.76	+1.6
2,672,756	+		CCNA_02523	0.76	+1.1
2,672,759	-		CCNA_02523	0.77	+0.4
2,672,765	+		CCNA_02523	0.78	+1.5
2,672,765	+		CCNA_02523	0.78	+0.7
2,672,765	+		CCNA_02523	0.78	+1.0
2,672,765	+		CCNA_02523	0.78	+1.5
2,672,765	+		CCNA_02523	0.78	+0.8
2,672,773	-		CCNA_02523	0.79	-0.6
2,672,773	-		CCNA_02523	0.79	+0.3
2,672,773	-		CCNA_02523	0.79	+0.1
2,672,775	+		CCNA_02523	0.80	+1.0
2,672,781	-		CCNA_02523	0.81	-1.3
2,672,781	-		CCNA_02523	0.81	-0.3
2,672,806	-		CCNA_02523	0.86	+1.1
2,672,852	+				+1.1
2,672,878	-				-0.8
2,672,884	-				-0.0
2,672,910	+				+0.1
2,672,938	+				-0.0
2,672,946	-				+0.5
2,672,956	+				-0.7
2,672,959	-				+2.4
2,672,964	-				+0.5
2,672,964	-				+1.7
2,672,964	-				+1.0
2,672,974	+				-0.3
2,672,982	-				+1.0
2,673,001	-				-0.0
2,673,007	+		CCNA_03899	0.11	-1.5
2,673,009	-		CCNA_03899	0.11	+0.4
2,673,010	+		CCNA_03899	0.12	-1.5
2,673,018	-		CCNA_03899	0.13	-0.2
2,673,052	+		CCNA_03899	0.20	-1.1
2,673,065	+		CCNA_03899	0.23	-0.2
2,673,067	-		CCNA_03899	0.23	-0.1
2,673,073	+		CCNA_03899	0.24	+0.2
2,673,073	-		CCNA_03899	0.24	+1.1
2,673,080	+		CCNA_03899	0.26	+0.8
2,673,109	+		CCNA_03899	0.32	-0.1
2,673,122	-		CCNA_03899	0.34	-1.1
2,673,127	-		CCNA_03899	0.35	+0.7
2,673,146	+		CCNA_03899	0.39	+0.0
2,673,146	+		CCNA_03899	0.39	+1.5
2,673,151	+		CCNA_03899	0.40	-1.1
2,673,183	-		CCNA_03899	0.47	+0.5
2,673,317	-		CCNA_03899	0.74	+1.0
2,673,330	+		CCNA_03899	0.77	+0.0
2,673,330	+		CCNA_03899	0.77	-0.3
2,673,346	+		CCNA_03899	0.80	-3.2
2,673,347	+		CCNA_03899	0.80	+2.1
2,673,348	+		CCNA_03899	0.80	+0.0
2,673,355	-		CCNA_03899	0.82	-0.7
2,673,395	+				-0.9
2,673,405	+				-0.6
2,673,405	+				-0.5
2,673,413	-				+0.8
2,673,415	-				+0.7
2,673,439	+				+1.1
2,673,447	-				+0.2
2,673,450	+				-0.8
2,673,450	+				+0.1
2,673,453	-				-0.1
2,673,458	-				-0.6
2,673,468	-				+0.0
2,673,486	-				-0.1
2,673,486	-				-0.9
2,673,494	-				-0.7
2,673,537	+				+2.1
2,673,554	-				+0.3
2,673,572	-				-0.3
2,673,582	+				+0.4
2,673,582	+				-0.6
2,673,590	-				-1.0
2,673,590	-				+1.0
2,673,644	+				+0.1
2,673,717	+		CCNA_02525	0.11	+2.3
2,673,723	-		CCNA_02525	0.11	+1.8
2,673,725	-		CCNA_02525	0.12	-0.6
2,673,767	-		CCNA_02525	0.16	+1.5
2,673,767	-		CCNA_02525	0.16	+1.7
2,673,782	-		CCNA_02525	0.17	-0.4
2,673,818	+		CCNA_02525	0.21	+1.2
2,673,844	+		CCNA_02525	0.24	+0.3
2,673,873	+		CCNA_02525	0.26	+2.5
2,673,881	-		CCNA_02525	0.27	+1.1
2,673,896	+		CCNA_02525	0.29	+3.0
2,673,902	+		CCNA_02525	0.29	+1.7
2,673,902	+		CCNA_02525	0.29	+2.5
2,673,902	+		CCNA_02525	0.29	+2.7
2,673,902	+		CCNA_02525	0.29	+0.6
2,673,902	+		CCNA_02525	0.29	+2.6
2,673,902	+		CCNA_02525	0.29	+2.1
2,673,902	+		CCNA_02525	0.29	+2.5
2,673,902	+		CCNA_02525	0.29	+1.5
2,673,902	+		CCNA_02525	0.29	+1.5
2,673,910	-		CCNA_02525	0.30	+1.7
2,673,926	+		CCNA_02525	0.32	+2.3
2,673,927	+		CCNA_02525	0.32	+1.9
2,673,934	-		CCNA_02525	0.33	+0.3
2,673,936	-		CCNA_02525	0.33	+0.9
2,673,970	+		CCNA_02525	0.36	+1.7
2,673,985	-		CCNA_02525	0.38	+1.5
2,674,024	+		CCNA_02525	0.42	+0.5
2,674,034	+		CCNA_02525	0.43	+1.9
2,674,080	+		CCNA_02525	0.47	+2.5
2,674,080	+		CCNA_02525	0.47	+2.9
2,674,088	-		CCNA_02525	0.48	+1.4
2,674,091	+		CCNA_02525	0.48	+1.4
2,674,137	-		CCNA_02525	0.53	+1.8
2,674,169	-		CCNA_02525	0.56	-0.1
2,674,169	-		CCNA_02525	0.56	-0.6
2,674,207	+		CCNA_02525	0.60	+2.6
2,674,207	+		CCNA_02525	0.60	+1.8
2,674,207	+		CCNA_02525	0.60	+1.4
2,674,207	+		CCNA_02525	0.60	+2.4
2,674,215	-		CCNA_02525	0.61	+1.0
2,674,215	-		CCNA_02525	0.61	-0.0
2,674,215	-		CCNA_02525	0.61	+0.0
2,674,215	-		CCNA_02525	0.61	+1.4
2,674,215	-		CCNA_02525	0.61	+0.3
2,674,251	-		CCNA_02525	0.64	-0.2
2,674,251	-		CCNA_02525	0.64	+0.1
2,674,278	+		CCNA_02525	0.67	+2.0
2,674,302	+		CCNA_02525	0.69	+2.5
2,674,302	+		CCNA_02525	0.69	+1.3
2,674,307	+		CCNA_02525	0.70	+1.6
2,674,310	-		CCNA_02525	0.70	-0.4
2,674,320	-		CCNA_02525	0.71	+0.5
2,674,341	+		CCNA_02525	0.73	+2.4
2,674,410	-		CCNA_02525	0.80	-0.5
2,674,509	+				+2.9
2,674,510	+				+2.9
2,674,534	-				-0.5
2,674,555	+				+2.3
2,674,589	+				+0.9
2,674,599	+				+0.9
2,674,611	+				+1.1
2,674,646	+		CCNA_03968	0.30	+1.1
2,674,646	+		CCNA_03968	0.30	+0.6
2,674,654	-		CCNA_03968	0.35	-0.1
2,674,654	-		CCNA_03968	0.35	+1.5
2,674,666	-		CCNA_03968	0.44	-1.7
2,674,720	-		CCNA_03968	0.82	-1.5
2,674,724	-		CCNA_03968	0.85	-0.7
2,674,726	+		CCNA_03968	0.87	+0.2
2,674,731	+				-0.4
2,674,731	+				+0.5
2,674,734	-				-0.3
2,674,748	+				+2.5
2,674,748	+				+1.7
2,674,865	+				+2.1
2,674,878	+		CCNA_02526	0.11	+2.8
2,674,878	+		CCNA_02526	0.11	+2.8
2,674,878	+		CCNA_02526	0.11	+2.2
2,674,878	+		CCNA_02526	0.11	+2.5
2,674,878	+		CCNA_02526	0.11	+2.9
2,674,878	+		CCNA_02526	0.11	+2.9
2,674,878	+		CCNA_02526	0.11	+2.3
2,674,878	+		CCNA_02526	0.11	+2.4
2,674,878	+				+4.4
2,674,878	+		CCNA_02526	0.11	+1.8
2,674,878	+		CCNA_02526	0.11	+2.1
2,674,878	+		CCNA_02526	0.11	+2.6
2,674,886	-		CCNA_02526	0.11	+1.9
2,674,886	-		CCNA_02526	0.11	+1.7
2,674,886	-		CCNA_02526	0.11	+0.8
2,674,886	-		CCNA_02526	0.11	+1.4
2,674,886	-		CCNA_02526	0.11	-0.6
2,674,886	-		CCNA_02526	0.11	+1.3
2,674,886	-		CCNA_02526	0.11	+1.7
2,674,886	-		CCNA_02526	0.11	+1.5
2,674,886	-		CCNA_02526	0.11	+2.1
2,674,886	-		CCNA_02526	0.11	+0.9
2,674,886	-		CCNA_02526	0.11	+0.5
2,674,886	-		CCNA_02526	0.11	+3.8
2,674,886	-		CCNA_02526	0.11	+1.3
2,674,886	-		CCNA_02526	0.11	+1.6
2,674,915	-		CCNA_02526	0.13	+1.5
2,674,922	+		CCNA_02526	0.14	+2.3
2,675,020	+		CCNA_02526	0.21	+0.9
2,675,040	+		CCNA_02526	0.23	+2.5
2,675,040	+		CCNA_02526	0.23	+2.5
2,675,048	-		CCNA_02526	0.24	+1.4
2,675,081	+		CCNA_02526	0.26	+2.6
2,675,081	+		CCNA_02526	0.26	+2.8
2,675,089	-		CCNA_02526	0.27	+0.1
2,675,142	+		CCNA_02526	0.31	+2.2
2,675,142	+		CCNA_02526	0.31	+2.5
2,675,143	+		CCNA_02526	0.31	+2.5
2,675,187	-		CCNA_02526	0.34	+1.0
2,675,240	+		CCNA_02526	0.38	+3.0
2,675,245	+		CCNA_02526	0.39	+2.4
2,675,265	-		CCNA_02526	0.40	-0.1
2,675,270	-		CCNA_02526	0.41	+0.9
2,675,274	+		CCNA_02526	0.41	+1.5
2,675,275	+		CCNA_02526	0.41	+2.2
2,675,275	-		CCNA_02526	0.41	+2.1
2,675,283	-		CCNA_02526	0.42	+2.1
2,675,304	+		CCNA_02526	0.43	+2.0
2,675,320	+		CCNA_02526	0.44	+1.9
2,675,345	-		CCNA_02526	0.46	-0.1
2,675,371	+		CCNA_02526	0.48	+2.0
2,675,401	+		CCNA_02526	0.51	+0.6
2,675,424	+		CCNA_02526	0.52	+1.5
2,675,455	+		CCNA_02526	0.55	+1.2
2,675,485	+		CCNA_02526	0.57	+3.6
2,675,485	+		CCNA_02526	0.57	+2.2
2,675,502	+		CCNA_02526	0.58	+2.7
2,675,502	+		CCNA_02526	0.58	+2.0
2,675,502	+		CCNA_02526	0.58	+1.8
2,675,502	+		CCNA_02526	0.58	+1.5
2,675,503	+		CCNA_02526	0.59	+2.6
2,675,510	-		CCNA_02526	0.59	+0.5
2,675,510	-		CCNA_02526	0.59	+1.6
2,675,510	-		CCNA_02526	0.59	+1.3
2,675,533	-		CCNA_02526	0.61	+2.8
2,675,582	+		CCNA_02526	0.65	+1.8
2,675,592	+		CCNA_02526	0.65	+2.1