Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01814

Experiment: PYE with Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Carbenicillin 0.1 mg/ml
1,937,748	+				-1.2
1,937,756	-				-1.0
1,937,765	+				-1.4
1,937,774	+				+0.9
1,937,787	-				-1.1
1,937,816	+		CCNA_01813	0.11	+1.4
1,937,817	+		CCNA_01813	0.11	+0.1
1,937,875	-		CCNA_01813	0.17	-0.9
1,937,953	+		CCNA_01813	0.25	+2.2
1,937,965	+		CCNA_01813	0.26	+2.2
1,937,999	+		CCNA_01813	0.29	+0.6
1,938,037	+		CCNA_01813	0.33	+1.5
1,938,043	+		CCNA_01813	0.34	+4.1
1,938,055	+		CCNA_01813	0.35	+2.4
1,938,055	+		CCNA_01813	0.35	+3.4
1,938,063	+		CCNA_01813	0.36	-1.1
1,938,063	-		CCNA_01813	0.36	-0.0
1,938,068	+		CCNA_01813	0.36	+1.8
1,938,088	+		CCNA_01813	0.38	+0.8
1,938,151	+		CCNA_01813	0.44	+2.3
1,938,170	+		CCNA_01813	0.46	+2.4
1,938,210	+		CCNA_01813	0.50	+0.7
1,938,212	-		CCNA_01813	0.50	-0.4
1,938,220	+		CCNA_01813	0.51	+0.8
1,938,220	+		CCNA_01813	0.51	+2.2
1,938,220	+		CCNA_01813	0.51	+1.1
1,938,220	+				+5.9
1,938,220	+		CCNA_01813	0.51	+1.1
1,938,220	+		CCNA_01813	0.51	+1.6
1,938,222	+		CCNA_01813	0.51	-0.0
1,938,228	-		CCNA_01813	0.52	+0.1
1,938,246	+		CCNA_01813	0.54	-0.4
1,938,291	+		CCNA_01813	0.58	+0.4
1,938,299	-		CCNA_01813	0.59	+0.8
1,938,361	-		CCNA_01813	0.65	-0.6
1,938,363	+		CCNA_01813	0.65	+0.8
1,938,389	+		CCNA_01813	0.68	+1.5
1,938,397	+		CCNA_01813	0.69	+0.8
1,938,397	+		CCNA_01813	0.69	+1.4
1,938,489	+		CCNA_01813	0.78	+1.2
1,938,527	-		CCNA_01813	0.82	-0.0
1,938,547	-		CCNA_01813	0.84	-1.2
1,938,585	+		CCNA_01813	0.87	+1.7
1,938,622	-				-0.9
1,938,622	-				-0.2
1,938,622	-				-3.5
1,938,628	+				+1.6
1,938,663	-				-2.1
1,938,710	-				-0.7
1,938,721	+				+1.6
1,938,758	-				+1.3
1,938,765	+				+1.1
1,938,779	+				+1.9
1,938,867	+		CCNA_01814	0.14	+2.6
1,938,889	+		CCNA_01814	0.16	+3.4
1,938,912	+		CCNA_01814	0.18	+1.6
1,938,924	+		CCNA_01814	0.19	+3.0
1,938,941	+		CCNA_01814	0.21	+2.4
1,938,977	+		CCNA_01814	0.24	+0.7
1,939,085	+		CCNA_01814	0.34	+1.8
1,939,139	+		CCNA_01814	0.38	+3.4
1,939,166	-		CCNA_01814	0.41	+1.5
1,939,210	+		CCNA_01814	0.45	+3.2
1,939,215	+		CCNA_01814	0.45	+3.4
1,939,298	+		CCNA_01814	0.53	+3.0
1,939,298	+		CCNA_01814	0.53	+3.2
1,939,298	+		CCNA_01814	0.53	+2.5
1,939,298	+		CCNA_01814	0.53	+3.2
1,939,298	+		CCNA_01814	0.53	+3.2
1,939,316	-		CCNA_01814	0.54	+1.8
1,939,369	-		CCNA_01814	0.59	+2.6
1,939,381	+		CCNA_01814	0.60	+3.1
1,939,398	+		CCNA_01814	0.61	+3.6
1,939,400	+		CCNA_01814	0.62	+3.2
1,939,422	+		CCNA_01814	0.64	+3.5
1,939,441	+		CCNA_01814	0.65	+2.9
1,939,454	-		CCNA_01814	0.66	+1.0
1,939,456	+		CCNA_01814	0.67	+3.1
1,939,515	+		CCNA_01814	0.72	+3.4
1,939,554	+		CCNA_01814	0.75	+3.3
1,939,684	+		CCNA_01814	0.87	+2.7
1,939,689	+		CCNA_01814	0.87	+3.1
1,939,697	-		CCNA_01814	0.88	-0.7
1,939,697	-		CCNA_01814	0.88	+1.0
1,939,869	+				+2.7
1,939,872	+				+3.1
1,939,897	-				+1.3
1,939,946	+				+3.3
1,939,977	+		CCNA_01815	0.11	+3.7
1,939,994	+		CCNA_01815	0.12	+3.5
1,939,994	+		CCNA_01815	0.12	+3.2
1,940,050	+		CCNA_01815	0.16	+3.4
1,940,057	+		CCNA_01815	0.16	+3.9
1,940,090	+		CCNA_01815	0.19	+3.3
1,940,101	+		CCNA_01815	0.19	+3.6
1,940,159	-		CCNA_01815	0.23	+2.3
1,940,161	+		CCNA_01815	0.24	+3.2
1,940,203	+		CCNA_01815	0.27	+4.0
1,940,227	-		CCNA_01815	0.28	+2.6
1,940,257	+		CCNA_01815	0.30	+4.2
1,940,287	+		CCNA_01815	0.32	+3.3
1,940,290	+		CCNA_01815	0.33	+3.4
1,940,311	-		CCNA_01815	0.34	+2.6
1,940,327	+		CCNA_01815	0.35	+3.2
1,940,368	-		CCNA_01815	0.38	+1.2
1,940,385	+		CCNA_01815	0.39	+3.4
1,940,425	-		CCNA_01815	0.42	+1.6
1,940,449	+		CCNA_01815	0.44	+3.5
1,940,449	+		CCNA_01815	0.44	+3.0
1,940,457	-		CCNA_01815	0.44	-0.2
1,940,464	+		CCNA_01815	0.45	+4.0
1,940,464	+		CCNA_01815	0.45	+3.2
1,940,487	+		CCNA_01815	0.46	+2.8
1,940,555	+		CCNA_01815	0.51	+3.8
1,940,572	-		CCNA_01815	0.52	+1.3
1,940,605	+		CCNA_01815	0.55	+3.4
1,940,652	+		CCNA_01815	0.58	+3.2
1,940,689	-		CCNA_01815	0.61	+1.8
1,940,689	-		CCNA_01815	0.61	+0.9
1,940,696	+		CCNA_01815	0.61	+3.0
1,940,696	+		CCNA_01815	0.61	+3.8
1,940,710	+		CCNA_01815	0.62	+3.3
1,940,741	+		CCNA_01815	0.64	+3.2
1,940,788	+		CCNA_01815	0.68	+3.3
1,940,815	+		CCNA_01815	0.70	+3.7
1,940,823	-		CCNA_01815	0.70	-0.2