Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS05240

Experiment: Ceftazidime 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.05 mg/ml
1,179,253	+		ABZR86_RS05230	0.71	+0.0
1,179,253	+		ABZR86_RS05230	0.71	+0.2
1,179,253	+		ABZR86_RS05230	0.71	-0.0
1,179,254	-		ABZR86_RS05230	0.71	+0.2
1,179,254	-		ABZR86_RS05230	0.71	+1.0
1,179,260	-		ABZR86_RS05230	0.72	-0.7
1,179,260	-		ABZR86_RS05230	0.72	-0.4
1,179,503	+				-0.2
1,179,542	-				-0.8
1,179,547	+				+0.5
1,179,548	-				+0.9
1,179,665	+		ABZR86_RS05235	0.21	-0.3
1,179,665	+		ABZR86_RS05235	0.21	-0.8
1,179,734	+		ABZR86_RS05235	0.31	+0.1
1,179,734	+		ABZR86_RS05235	0.31	-0.2
1,179,734	+		ABZR86_RS05235	0.31	-0.3
1,179,734	+		ABZR86_RS05235	0.31	+0.3
1,179,734	+		ABZR86_RS05235	0.31	+0.1
1,179,735	-		ABZR86_RS05235	0.31	-0.7
1,179,735	-		ABZR86_RS05235	0.31	-0.1
1,180,133	+				+0.3
1,180,254	-		ABZR86_RS05240	0.10	-0.6
1,180,348	-		ABZR86_RS05240	0.50	-0.0
1,180,348	-		ABZR86_RS05240	0.50	-1.3
1,180,348	-		ABZR86_RS05240	0.50	-0.3
1,180,498	+				-0.6
1,180,498	+				+0.2
1,180,499	-				+0.6
1,180,506	+				-0.2
1,180,602	+				+0.2
1,180,645	-				-0.2
1,180,662	+				-0.1
1,180,662	+				-0.1
1,180,663	-				+0.2
1,180,688	+				-0.3
1,180,825	+		ABZR86_RS05245	0.20	+1.1
1,180,826	-		ABZR86_RS05245	0.20	+2.1
1,180,873	+		ABZR86_RS05245	0.27	+0.5
1,180,873	+		ABZR86_RS05245	0.27	-0.1
1,180,874	-		ABZR86_RS05245	0.27	-0.0
1,180,888	-		ABZR86_RS05245	0.29	-0.2
1,180,888	-		ABZR86_RS05245	0.29	-0.8
1,180,888	-		ABZR86_RS05245	0.29	-2.0
1,180,951	+		ABZR86_RS05245	0.37	+0.1
1,180,951	+		ABZR86_RS05245	0.37	-0.4
1,180,952	-		ABZR86_RS05245	0.37	-0.1
1,181,068	+		ABZR86_RS05245	0.53	-0.3
1,181,068	+		ABZR86_RS05245	0.53	-0.5
1,181,068	+		ABZR86_RS05245	0.53	+0.7
1,181,068	+		ABZR86_RS05245	0.53	+0.3
1,181,068	+		ABZR86_RS05245	0.53	+0.2
1,181,069	-		ABZR86_RS05245	0.53	+0.5
1,181,069	-		ABZR86_RS05245	0.53	-0.3
1,181,069	-		ABZR86_RS05245	0.53	-0.3
1,181,069	-		ABZR86_RS05245	0.53	+1.1
1,181,069	-		ABZR86_RS05245	0.53	+0.9
1,181,137	+		ABZR86_RS05245	0.62	+0.4
1,181,137	+		ABZR86_RS05245	0.62	+0.2
1,181,137	+		ABZR86_RS05245	0.62	+0.1
1,181,137	+		ABZR86_RS05245	0.62	+1.4
1,181,137	+		ABZR86_RS05245	0.62	+0.1
1,181,137	+		ABZR86_RS05245	0.62	-0.5
1,181,138	-		ABZR86_RS05245	0.62	+0.5
1,181,138	-		ABZR86_RS05245	0.62	-0.4
1,181,138	-		ABZR86_RS05245	0.62	+0.1
1,181,138	-		ABZR86_RS05245	0.62	+0.2
1,181,138	-		ABZR86_RS05245	0.62	+0.9
1,181,239	-		ABZR86_RS05245	0.76	-0.5
1,181,240	-		ABZR86_RS05245	0.76	+1.4
1,181,388	+				-0.4
1,181,388	+				-0.2
1,181,389	-				+0.4
1,181,389	-				-0.8
1,181,389	-				-0.5
1,181,389	-				+0.2