Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS05185

Experiment: Ceftazidime 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.05 mg/ml
1,171,610	+		ABZR86_RS05175	0.38	-0.1
1,171,610	+		ABZR86_RS05175	0.38	-0.8
1,171,610	+		ABZR86_RS05175	0.38	+0.1
1,171,610	+		ABZR86_RS05175	0.38	+0.1
1,171,610	+		ABZR86_RS05175	0.38	-0.1
1,171,610	+		ABZR86_RS05175	0.38	-0.5
1,171,610	+		ABZR86_RS05175	0.38	-1.2
1,171,793	+		ABZR86_RS05175	0.60	-1.7
1,171,794	-		ABZR86_RS05175	0.60	-0.3
1,171,884	-		ABZR86_RS05175	0.71	+0.1
1,171,884	-		ABZR86_RS05175	0.71	-0.3
1,171,988	+		ABZR86_RS05175	0.83	+1.0
1,172,095	+				+1.0
1,172,096	-				-0.8
1,172,193	+				-0.7
1,172,194	-				+0.3
1,172,194	-				-0.5
1,172,194	-				+0.5
1,172,413	-		ABZR86_RS05180	0.77	+0.4
1,172,413	-		ABZR86_RS05180	0.77	+0.2
1,172,413	-		ABZR86_RS05180	0.77	-0.5
1,172,415	+		ABZR86_RS05180	0.78	-0.9
1,172,416	-		ABZR86_RS05180	0.78	+0.0
1,172,416	-		ABZR86_RS05180	0.78	-1.1
1,172,416	-		ABZR86_RS05180	0.78	-0.1
1,172,506	+				+0.5
1,172,506	+				-0.3
1,172,507	-				-0.6
1,172,534	+				-0.5
1,172,534	+				+0.0
1,172,534	+				-0.1
1,172,535	-				+0.2
1,172,567	+				+0.0
1,172,567	+				-1.4
1,172,568	-				-0.1
1,172,568	-				-0.2
1,172,570	+				-0.4
1,172,571	-				+0.1
1,172,571	-				-0.3
1,172,653	+				+0.3
1,172,654	-				-0.6
1,172,682	-		ABZR86_RS05185	0.11	+0.0
1,172,690	+		ABZR86_RS05185	0.12	+0.5
1,172,690	+		ABZR86_RS05185	0.12	-0.0
1,172,690	+		ABZR86_RS05185	0.12	+0.4
1,172,690	+		ABZR86_RS05185	0.12	-0.1
1,172,753	+		ABZR86_RS05185	0.16	+0.3
1,172,754	-		ABZR86_RS05185	0.16	-0.1
1,172,849	+		ABZR86_RS05185	0.23	-0.0
1,172,850	-		ABZR86_RS05185	0.23	-0.4
1,172,850	-		ABZR86_RS05185	0.23	-0.4
1,172,850	-		ABZR86_RS05185	0.23	+0.5
1,172,990	+		ABZR86_RS05185	0.33	-0.4
1,172,991	-		ABZR86_RS05185	0.34	+0.2
1,172,991	-		ABZR86_RS05185	0.34	-0.4
1,172,991	-		ABZR86_RS05185	0.34	+0.5
1,172,995	-		ABZR86_RS05185	0.34	-0.1
1,173,125	+		ABZR86_RS05185	0.43	+0.1
1,173,126	-		ABZR86_RS05185	0.43	-0.3
1,173,126	-		ABZR86_RS05185	0.43	-0.7
1,173,158	+		ABZR86_RS05185	0.46	+0.3
1,173,158	+		ABZR86_RS05185	0.46	-0.1
1,173,158	+		ABZR86_RS05185	0.46	+0.0
1,173,158	+		ABZR86_RS05185	0.46	-0.3
1,173,159	-		ABZR86_RS05185	0.46	-0.6
1,173,465	-		ABZR86_RS05185	0.68	-0.5
1,173,465	-		ABZR86_RS05185	0.68	-0.4
1,173,560	+		ABZR86_RS05185	0.75	-0.3
1,173,560	+		ABZR86_RS05185	0.75	-0.5
1,173,560	+		ABZR86_RS05185	0.75	+0.0
1,173,560	+		ABZR86_RS05185	0.75	+0.0
1,173,561	-		ABZR86_RS05185	0.75	+0.6
1,173,561	-		ABZR86_RS05185	0.75	-0.1
1,173,561	-		ABZR86_RS05185	0.75	+0.5
1,173,568	+		ABZR86_RS05185	0.76	-0.9
1,173,654	-		ABZR86_RS05185	0.82	+0.0
1,173,665	+		ABZR86_RS05185	0.83	-0.2
1,173,755	+		ABZR86_RS05185	0.90	-1.1
1,173,756	-		ABZR86_RS05185	0.90	+1.1
1,173,756	-		ABZR86_RS05185	0.90	-0.1
1,173,756	-		ABZR86_RS05185	0.90	-0.5
1,173,756	-		ABZR86_RS05185	0.90	-0.6
1,173,853	-				-0.1
1,174,013	+				-0.5
1,174,014	-				-0.2
1,174,076	+		ABZR86_RS05190	0.27	+0.1
1,174,077	-		ABZR86_RS05190	0.27	+0.3
1,174,077	-		ABZR86_RS05190	0.27	+0.1
1,174,266	-				+0.0
1,174,287	-				-0.1
1,174,388	+				-0.0
1,174,388	+				+0.5
1,174,388	+				+0.1
1,174,388	+				-0.4
1,174,388	+				-1.1
1,174,389	-				+0.2
1,174,389	-				+0.3
1,174,389	-				+0.5
1,174,389	-				+0.3
1,174,389	-				+0.6
1,174,389	-				-0.2
1,174,405	+				+0.2
1,174,665	-				+0.1
1,174,665	-				-1.0
1,174,691	+				+1.0
1,174,809	+				+0.5
1,174,809	+				+0.9
1,174,809	+				+0.3
1,174,810	-				-0.2