Experiment: Ceftazidime 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS03300 and ABZR86_RS03305 are separated by 67 nucleotides ABZR86_RS03305 and ABZR86_RS03310 are separated by 196 nucleotides ABZR86_RS03310 and ABZR86_RS03315 are separated by 5 nucleotides
ABZR86_RS03300: ABZR86_RS03300 - hypothetical protein, at 693,964 to 694,983
_RS03300
ABZR86_RS03305: ABZR86_RS03305 - phage tail sheath C-terminal domain-containing protein, at 695,051 to 696,439
_RS03305
ABZR86_RS03310: ABZR86_RS03310 - phage tail protein, at 696,636 to 697,076
_RS03310
ABZR86_RS03315: ABZR86_RS03315 - phage tail protein, at 697,082 to 697,537
_RS03315
Position (kb) 695
696
697 Strain fitness (log2 ratio) -2
-1
0
1 at 694.282 kb on + strand, within ABZR86_RS03300 at 694.282 kb on + strand, within ABZR86_RS03300 at 694.712 kb on + strand, within ABZR86_RS03300 at 694.820 kb on - strand, within ABZR86_RS03300 at 694.975 kb on + strand at 694.976 kb on - strand at 694.976 kb on - strand at 694.981 kb on + strand at 694.981 kb on + strand at 694.981 kb on + strand at 694.982 kb on - strand at 695.044 kb on - strand at 695.057 kb on + strand at 695.075 kb on + strand at 695.352 kb on - strand, within ABZR86_RS03305 at 695.366 kb on + strand, within ABZR86_RS03305 at 695.393 kb on + strand, within ABZR86_RS03305 at 695.393 kb on + strand, within ABZR86_RS03305 at 695.394 kb on - strand, within ABZR86_RS03305 at 695.414 kb on + strand, within ABZR86_RS03305 at 695.414 kb on + strand, within ABZR86_RS03305 at 695.507 kb on + strand, within ABZR86_RS03305 at 695.508 kb on - strand, within ABZR86_RS03305 at 695.508 kb on - strand, within ABZR86_RS03305 at 695.823 kb on - strand, within ABZR86_RS03305 at 695.823 kb on - strand, within ABZR86_RS03305 at 695.943 kb on - strand, within ABZR86_RS03305 at 695.943 kb on - strand, within ABZR86_RS03305 at 696.598 kb on - strand at 696.652 kb on - strand at 697.091 kb on + strand at 697.092 kb on - strand at 697.112 kb on + strand at 697.115 kb on + strand at 697.116 kb on - strand at 697.199 kb on + strand, within ABZR86_RS03315 at 697.268 kb on + strand, within ABZR86_RS03315
Per-strain Table
Position Strand Gene LocusTag Fraction Ceftazidime 0.05 mg/ml remove 694,282 + ABZR86_RS03300 0.31 +0.1 694,282 + ABZR86_RS03300 0.31 +0.3 694,712 + ABZR86_RS03300 0.73 -0.1 694,820 - ABZR86_RS03300 0.84 +0.2 694,975 + -0.0 694,976 - +1.5 694,976 - +0.2 694,981 + -0.4 694,981 + +0.1 694,981 + +1.0 694,982 - +0.5 695,044 - +0.3 695,057 + -0.4 695,075 + -0.4 695,352 - ABZR86_RS03305 0.22 +0.3 695,366 + ABZR86_RS03305 0.23 -0.4 695,393 + ABZR86_RS03305 0.25 +0.7 695,393 + ABZR86_RS03305 0.25 -0.4 695,394 - ABZR86_RS03305 0.25 -0.2 695,414 + ABZR86_RS03305 0.26 -0.2 695,414 + ABZR86_RS03305 0.26 +0.3 695,507 + ABZR86_RS03305 0.33 +1.0 695,508 - ABZR86_RS03305 0.33 +0.2 695,508 - ABZR86_RS03305 0.33 -1.8 695,823 - ABZR86_RS03305 0.56 -0.2 695,823 - ABZR86_RS03305 0.56 -0.0 695,943 - ABZR86_RS03305 0.64 -0.0 695,943 - ABZR86_RS03305 0.64 -0.2 696,598 - -0.5 696,652 - +0.6 697,091 + -1.6 697,092 - +0.4 697,112 + +0.1 697,115 + +0.4 697,116 - +0.3 697,199 + ABZR86_RS03315 0.26 +1.0 697,268 + ABZR86_RS03315 0.41 +0.7
Or see this region's nucleotide sequence