Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS00035

Experiment: Ceftazidime 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 0.05 mg/ml
5,519	-		ABZR86_RS00030	0.64	+0.3
5,704	+		ABZR86_RS00030	0.76	-0.5
5,705	-		ABZR86_RS00030	0.76	-0.4
5,705	-		ABZR86_RS00030	0.76	-0.2
5,705	-		ABZR86_RS00030	0.76	-0.7
5,822	-		ABZR86_RS00030	0.83	-0.3
5,848	+		ABZR86_RS00030	0.85	-0.8
5,849	-		ABZR86_RS00030	0.85	-0.4
5,849	-		ABZR86_RS00030	0.85	+0.0
5,849	-		ABZR86_RS00030	0.85	-0.2
6,294	-				+0.1
6,294	-				+0.1
6,423	+				+0.2
6,423	+				+0.7
6,423	+				-0.1
6,424	-				+0.1
6,424	-				-1.0
6,424	-				+0.8
6,424	-				-1.1
6,493	+				+1.9
7,097	-		ABZR86_RS00035	0.42	+0.3
7,297	+		ABZR86_RS00035	0.54	+0.0
7,297	+		ABZR86_RS00035	0.54	-0.4
7,309	+		ABZR86_RS00035	0.55	-0.7
7,336	+		ABZR86_RS00035	0.56	-1.7
7,669	+		ABZR86_RS00035	0.76	+0.5
7,738	+		ABZR86_RS00035	0.80	-0.1
7,738	+		ABZR86_RS00035	0.80	+0.6
7,739	-		ABZR86_RS00035	0.80	-0.2
8,355	-				+0.7
8,435	+		ABZR86_RS00040	0.10	+0.2
8,435	+		ABZR86_RS00040	0.10	-0.0
8,436	-		ABZR86_RS00040	0.11	-2.1
8,526	+		ABZR86_RS00040	0.19	+0.3
8,681	+		ABZR86_RS00040	0.34	+1.0
8,815	+		ABZR86_RS00040	0.47	+1.0
8,815	+		ABZR86_RS00040	0.47	-0.4
8,815	+		ABZR86_RS00040	0.47	-0.1
8,816	-		ABZR86_RS00040	0.47	-0.2
8,816	-		ABZR86_RS00040	0.47	-0.2
8,816	-		ABZR86_RS00040	0.47	+0.8
8,816	-		ABZR86_RS00040	0.47	+0.3
8,816	-		ABZR86_RS00040	0.47	-0.3
8,816	-		ABZR86_RS00040	0.47	+0.9
8,816	-		ABZR86_RS00040	0.47	+0.3
8,871	+		ABZR86_RS00040	0.52	-0.7
8,997	-		ABZR86_RS00040	0.64	+0.6