Experiment: MoYLS4 with Cephalothin 0.625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2564 and DvMF_2565 are separated by 159 nucleotides DvMF_2565 and DvMF_2566 are separated by 91 nucleotides
DvMF_2564: DvMF_2564 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 3,239,471 to 3,241,990
_2564
DvMF_2565: DvMF_2565 - periplasmic phosphate binding protein (RefSeq), at 3,242,150 to 3,243,184
_2565
DvMF_2566: DvMF_2566 - phosphate ABC transporter, inner membrane subunit PstC (RefSeq), at 3,243,276 to 3,244,520
_2566
Position (kb)
3242
3243
3244 Strain fitness (log2 ratio)
-1
0
1 at 3241.214 kb on + strand, within DvMF_2564 at 3241.229 kb on + strand, within DvMF_2564 at 3241.263 kb on - strand, within DvMF_2564 at 3241.347 kb on + strand, within DvMF_2564 at 3241.469 kb on - strand, within DvMF_2564 at 3241.609 kb on + strand, within DvMF_2564 at 3242.059 kb on + strand at 3242.060 kb on + strand at 3242.242 kb on + strand at 3242.390 kb on - strand, within DvMF_2565 at 3242.622 kb on + strand, within DvMF_2565 at 3243.046 kb on + strand, within DvMF_2565 at 3243.054 kb on - strand, within DvMF_2565 at 3243.140 kb on + strand at 3243.335 kb on + strand at 3243.335 kb on + strand at 3243.366 kb on - strand at 3243.456 kb on - strand, within DvMF_2566 at 3243.511 kb on - strand, within DvMF_2566 at 3243.610 kb on - strand, within DvMF_2566 at 3243.637 kb on - strand, within DvMF_2566 at 3243.637 kb on - strand, within DvMF_2566 at 3243.898 kb on - strand, within DvMF_2566 at 3243.984 kb on + strand, within DvMF_2566 at 3243.992 kb on - strand, within DvMF_2566 at 3244.116 kb on - strand, within DvMF_2566
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Cephalothin 0.625 mg/ml remove 3,241,214 + DvMF_2564 0.69 -0.7 3,241,229 + DvMF_2564 0.70 -0.8 3,241,263 - DvMF_2564 0.71 -0.4 3,241,347 + DvMF_2564 0.74 -0.7 3,241,469 - DvMF_2564 0.79 -0.5 3,241,609 + DvMF_2564 0.85 -0.3 3,242,059 + -0.6 3,242,060 + -0.1 3,242,242 + -0.6 3,242,390 - DvMF_2565 0.23 -1.1 3,242,622 + DvMF_2565 0.46 -0.6 3,243,046 + DvMF_2565 0.87 -0.4 3,243,054 - DvMF_2565 0.87 -0.8 3,243,140 + -0.3 3,243,335 + +0.0 3,243,335 + -0.7 3,243,366 - -0.3 3,243,456 - DvMF_2566 0.14 -0.4 3,243,511 - DvMF_2566 0.19 -0.6 3,243,610 - DvMF_2566 0.27 -0.4 3,243,637 - DvMF_2566 0.29 -0.2 3,243,637 - DvMF_2566 0.29 -0.2 3,243,898 - DvMF_2566 0.50 -0.4 3,243,984 + DvMF_2566 0.57 -0.2 3,243,992 - DvMF_2566 0.58 -0.3 3,244,116 - DvMF_2566 0.67 -0.4
Or see this region's nucleotide sequence