Experiment: MoYLS4 with Cephalothin 0.625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1583 and DvMF_1584 overlap by 8 nucleotides DvMF_1584 and DvMF_1585 are separated by 39 nucleotides DvMF_1585 and DvMF_1586 are separated by 374 nucleotides
DvMF_1583: DvMF_1583 - ABC transporter related (RefSeq), at 1,952,261 to 1,952,983
_1583
DvMF_1584: DvMF_1584 - ABC transporter related (RefSeq), at 1,952,976 to 1,953,680
_1584
DvMF_1585: DvMF_1585 - CBS domain containing protein (RefSeq), at 1,953,720 to 1,954,373
_1585
DvMF_1586: DvMF_1586 - extracellular solute-binding protein family 1 (RefSeq), at 1,954,748 to 1,955,749
_1586
Position (kb)
1953
1954
1955 Strain fitness (log2 ratio)
-1
0
1 at 1952.803 kb on - strand, within DvMF_1583 at 1952.919 kb on - strand at 1952.952 kb on + strand at 1953.141 kb on + strand, within DvMF_1584 at 1953.150 kb on - strand, within DvMF_1584 at 1953.190 kb on + strand, within DvMF_1584 at 1953.263 kb on - strand, within DvMF_1584 at 1953.324 kb on - strand, within DvMF_1584 at 1953.351 kb on + strand, within DvMF_1584 at 1953.532 kb on - strand, within DvMF_1584 at 1953.649 kb on - strand at 1953.723 kb on - strand at 1953.757 kb on - strand at 1953.935 kb on + strand, within DvMF_1585 at 1954.248 kb on - strand, within DvMF_1585 at 1954.476 kb on - strand at 1954.595 kb on + strand at 1954.663 kb on + strand at 1954.697 kb on + strand at 1954.732 kb on + strand at 1954.822 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Cephalothin 0.625 mg/ml remove 1,952,803 - DvMF_1583 0.75 -0.6 1,952,919 - -0.2 1,952,952 + -0.3 1,953,141 + DvMF_1584 0.23 -1.1 1,953,150 - DvMF_1584 0.25 +0.2 1,953,190 + DvMF_1584 0.30 -0.5 1,953,263 - DvMF_1584 0.41 -0.3 1,953,324 - DvMF_1584 0.49 -0.6 1,953,351 + DvMF_1584 0.53 -0.4 1,953,532 - DvMF_1584 0.79 -0.4 1,953,649 - -0.1 1,953,723 - -0.3 1,953,757 - +0.2 1,953,935 + DvMF_1585 0.33 -0.3 1,954,248 - DvMF_1585 0.81 -1.6 1,954,476 - +0.0 1,954,595 + +0.3 1,954,663 + -0.5 1,954,697 + +0.2 1,954,732 + -0.4 1,954,822 - -0.4
Or see this region's nucleotide sequence